RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 SLC38A6Q8IZM9 456 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 SPERTQ8NA61 448 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 ZNF511Q8NB15 262 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 OR8K3Q8NH51 312 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 ASB13Q8WXK3 278 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 SMAD5Q99717 465 aaKnown RBP11.19□□□□□ -0.62
COL4A6-204ENST00000461897 STRADBQ9C0K7 418 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 LAT2Q9GZY6 243 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 MMP25Q9NPA2 562 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 TAS2R8Q9NYW2 309 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 MTFP1Q9UDX5 166 aa11.19□□□□□ -0.62
COL4A6-204ENST00000461897 ING1Q9UK53 422 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-204ENST00000461897 PTRH2Q9Y3E5 179 aaKnown RBP11.19□□□□□ -0.62
COL4A6-204ENST00000461897 OTOGLQ3ZCN5 2332 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 MPDZO75970 2070 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 A0A1W2PNU3 283 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-204ENST00000461897 TMEM72A0PK05 275 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 ELOA3DA6NLF2 546 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-204ENST00000461897 TMEM212A6NML5 194 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 C4orf47A7E2U8 309 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 MCRIP1C9JLW8 97 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 HCRTR2O43614 444 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 STK17BO94768 372 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 RGS11O94810 467 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 OR8G3PP0DMU2 310 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 FAUP35544 74 aaKnown RBP11.18□□□□□ -0.62
COL4A6-204ENST00000461897 MAGEB1P43366 347 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 CLDN12P56749 244 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 SSBP1Q04837 148 aaKnown RBP11.18□□□□□ -0.62
COL4A6-204ENST00000461897 TOMM20Q15388 145 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 CSRP2Q16527 193 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 ELOA3BQ3SY89 546 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 GXYLT1Q4G148 440 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 ALG10Q5BKT4 473 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 B3GNTL1Q67FW5 361 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-204ENST00000461897 TMEM65Q6PI78 240 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 GLRX5Q86SX6 157 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 SERPINA12Q8IW75 414 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 GLB1L2Q8IW92 636 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 MEIOBQ8N635 442 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 LSM14AQ8ND56 463 aaKnown RBP11.18□□□□□ -0.62
COL4A6-204ENST00000461897 ELOA3Q8NG57 546 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 OR2G2Q8NGZ5 317 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 MCHR2Q969V1 340 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 TBL1XR1Q9BZK7 514 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 SLC17A5Q9NRA2 495 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 CA10Q9NS85 328 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 STEAP1Q9UHE8 339 aa11.18□□□□□ -0.62
COL4A6-204ENST00000461897 PCNX3Q9H6A9 2034 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 IGHV1-45A0A0A0MS14 117 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 CIB4A0PJX0 185 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 PRR33A8MZF0 331 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 PHYHO14832 338 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 B3GALNT1O75752 331 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 ALOX5APP20292 161 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 HOXD11P31277 338 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-204ENST00000461897 DLX5P56178 289 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 FBXW4P57775 412 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 CTXN1P60606 82 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 PSMA6P60900 246 aaKnown RBP11.17□□□□□ -0.62
COL4A6-204ENST00000461897 LTBQ06643 244 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 EEF1A1P5Q5VTE0 462 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 ANKRD16Q6P6B7 361 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 C3P1Q6ZMU1 363 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 OR2Y1Q8NGV0 311 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 PNPLA2Q96AD5 504 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 LIN37Q96GY3 246 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-204ENST00000461897 ADAD1Q96M93 576 aaKnown RBP11.17□□□□□ -0.62
COL4A6-204ENST00000461897 SFXN2Q96NB2 322 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 WDR76Q9H967 626 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 PARD6AQ9NPB6 346 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 PISDQ9UG56 409 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 SPEF1Q9Y4P9 236 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 HS3ST3B1Q9Y662 390 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 TMEM14AQ9Y6G1 99 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 DMXL1Q9Y485 3027 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 A0A087WV48 116 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 BET1O15155 118 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 GMFGO60234 142 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 SERPINI2O75830 405 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 TOXO94900 526 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 ALDOBP05062 364 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 MELTFP08582 738 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 CSF1P09603 554 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 COX6A1P12074 109 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 ANXA7P20073 488 aaKnown RBP11.17□□□□□ -0.62
COL4A6-204ENST00000461897 SDHBP21912 280 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 NFYAP23511 347 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-204ENST00000461897 EGR4Q05215 589 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 RASGEF1BQ0VAM2 473 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 RBMS2Q15434 407 aaKnown RBP11.17□□□□□ -0.62
COL4A6-204ENST00000461897 MPPED2Q15777 294 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 TOMM34Q15785 309 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-204ENST00000461897 TIPARPQ7Z3E1 657 aaKnown RBP11.17□□□□□ -0.62
COL4A6-204ENST00000461897 ZNF227Q86WZ6 799 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 OR6N1Q8NGY5 312 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 GPR148Q8TDV2 347 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 ELP5Q8TE02 316 aa11.17□□□□□ -0.62
COL4A6-204ENST00000461897 RBPMSQ93062 196 aaKnown RBP11.17□□□□□ -0.62
COL4A6-204ENST00000461897 ELMOD3Q96FG2 381 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms