RNA–Protein interactions for RNA: ENST00000461520.5

USP54-208, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best)

Gene USP54, Length 1,212 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-208ENST00000461520 B3GAT2Q9NPZ5 323 aa6.25□□□□□ -1.41
USP54-208ENST00000461520 SLC13A4Q9UKG4 626 aa6.25□□□□□ -1.41
USP54-208ENST00000461520 KCNS2Q9ULS6 477 aa6.25□□□□□ -1.41
USP54-208ENST00000461520 USP22Q9UPT9 525 aa6.25□□□□□ -1.41
USP54-208ENST00000461520 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.25□□□□□ -1.412e-6■■■■■ 27.7
USP54-208ENST00000461520 IGHV2OR16-5A0A0B4J2B6 119 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 ZNF726A6NNF4 738 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 hCG_2039718K7EN88 272 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 M0R3G1 203 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 TPST2O60704 377 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 FMO6PO60774 539 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 MFN2O95140 757 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 STAMBPO95630 424 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 MT-ATP6P00846 226 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 BGLAPP02818 100 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 HLA-DOBP13765 273 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 APEHP13798 732 aaKnown RBP6.24□□□□□ -1.41
USP54-208ENST00000461520 NPR2P20594 1047 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 CBLP22681 906 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 THBS4P35443 961 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 CAPZA2P47755 286 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 AQP5P55064 265 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 CDH12P55289 794 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 POU3F1Q03052 451 aaPredicted RBP6.24□□□□□ -1.41
USP54-208ENST00000461520 PUDPQ08623 228 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 RBBP4Q09028 425 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 NPRL3Q12980 569 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 PMS2P3Q13401 168 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 KLF9Q13886 244 aaPredicted RBP6.24□□□□□ -1.41
USP54-208ENST00000461520 SQLEQ14534 574 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 GSG1Q2KHT4 349 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 AGKQ53H12 422 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 RUNDC3AQ59EK9 446 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 PHYHD1Q5SRE7 291 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 FAM166AQ6J272 317 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 ZNF613Q6PF04 617 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 DLEU7Q6UYE1 221 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 NHLRC1Q6VVB1 395 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 PXKQ7Z7A4 578 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 MYPOPQ86VE0 399 aaPredicted RBP6.24□□□□□ -1.41
USP54-208ENST00000461520 ARMC8Q8IUR7 673 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 DYDC1Q8WWB3 177 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 ATP6V1G3Q96LB4 118 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 FOXN4Q96NZ1 517 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 MOGAT1Q96PD6 335 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 DOK1Q99704 481 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 EMC6Q9BV81 110 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 BPESC1Q9GZL8 116 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 DENND2DQ9H6A0 471 aaPredicted RBP6.24□□□□□ -1.41
USP54-208ENST00000461520 NOX3Q9HBY0 568 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 B3GNT2Q9NY97 397 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 MRPL39Q9NYK5 338 aaKnown RBP6.24□□□□□ -1.41
USP54-208ENST00000461520 LEF1Q9UJU2 399 aaPredicted RBP6.24□□□□□ -1.41
USP54-208ENST00000461520 ANGPT4Q9Y264 503 aa6.24□□□□□ -1.41
USP54-208ENST00000461520 IGHV4-61A0A0C4DH41 118 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 TMEM129A0AVI4 362 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 PLPP3O14495 311 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 CHP2O43745 196 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 HPRP00739 348 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 HLA-HP01893 362 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 DAOP14920 347 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 ZNF23P17027 643 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 SRD5A1P18405 259 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 HNF1AP20823 631 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 AHCYP23526 432 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 IGFBP5P24593 272 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 GIFP27352 417 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 AQP1P29972 269 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 EVX1P49640 407 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 SNTB2Q13425 540 aaKnown RBP6.23□□□□□ -1.41
USP54-208ENST00000461520 CAMK2DQ13557 499 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 DAG1Q14118 895 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 CARTPTQ16568 116 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 DUSP7Q16829 419 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 KRTAP24-1Q3LI83 254 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 IQCCQ4KMZ1 466 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 CARD17Q5XLA6 110 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 SLC18B1Q6NT16 456 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 C11orf87Q6NUJ2 197 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 ZNF813Q6ZN06 617 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 SPATA21Q7Z572 469 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 MDP1Q86V88 176 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 PTOV1Q86YD1 416 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 SLC30A8Q8IWU4 369 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 ZNF786Q8N393 782 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 SVOPLQ8N434 492 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 DPP10Q8N608 796 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 C10orf53Q8N6V4 93 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 SMYD1Q8NB12 490 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 C11orf65Q8NCR3 313 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 OR5J2Q8NH18 312 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 CKAP2Q8WWK9 683 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 MSI2Q96DH6 328 aaKnown RBP6.23□□□□□ -1.41
USP54-208ENST00000461520 ZNF75AQ96N20 296 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 MCHR1Q99705 422 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 ARHGDIGQ99819 225 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 WFDC6Q9BQY6 131 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 ULBP2Q9BZM5 246 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 MED29Q9NX70 200 aa6.23□□□□□ -1.41
USP54-208ENST00000461520 FBXL3Q9UKT7 428 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms