RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 DUSP13Q9UII6 198 aa19.34■□□□□ 0.69
TRAF4-207ENST00000461195 FZR1Q9UM11 496 aa19.34■□□□□ 0.69
TRAF4-207ENST00000461195 M0R233 179 aa19.33■□□□□ 0.68
TRAF4-207ENST00000461195 ACOT8O14734 319 aa19.33■□□□□ 0.68
TRAF4-207ENST00000461195 ARPC3O15145 178 aa19.33■□□□□ 0.68
TRAF4-207ENST00000461195 LCKP06239 509 aa19.33■□□□□ 0.68
TRAF4-207ENST00000461195 CDKN2AP42771 156 aaKnown RBP19.33■□□□□ 0.68
TRAF4-207ENST00000461195 GDI2P50395 445 aaKnown RBP19.33■□□□□ 0.68
TRAF4-207ENST00000461195 UGT2A3Q6UWM9 527 aa19.33■□□□□ 0.68
TRAF4-207ENST00000461195 ZNF620Q6ZNG0 422 aa19.33■□□□□ 0.68
TRAF4-207ENST00000461195 LRP11Q86VZ4 500 aa19.33■□□□□ 0.68
TRAF4-207ENST00000461195 GLB1L2Q8IW92 636 aa19.33■□□□□ 0.68
TRAF4-207ENST00000461195 OR9Q2Q8NGE9 314 aa19.33■□□□□ 0.68
TRAF4-207ENST00000461195 FOXN4Q96NZ1 517 aa19.33■□□□□ 0.68
TRAF4-207ENST00000461195 IFT27Q9BW83 186 aa19.33■□□□□ 0.68
TRAF4-207ENST00000461195 NUAK2Q9H093 628 aa19.33■□□□□ 0.68
TRAF4-207ENST00000461195 EMC7Q9NPA0 242 aa19.33■□□□□ 0.68
TRAF4-207ENST00000461195 REV1Q9UBZ9 1251 aa19.33■□□□□ 0.68
TRAF4-207ENST00000461195 CHD3Q12873 2000 aaKnown RBP19.33■□□□□ 0.68
TRAF4-207ENST00000461195 JMJD1CQ15652 2540 aa19.33■□□□□ 0.68
TRAF4-207ENST00000461195 RTTNQ86VV8 2226 aa19.32■□□□□ 0.68
TRAF4-207ENST00000461195 LOC100509620A0A075B734 347 aa19.32■□□□□ 0.68
TRAF4-207ENST00000461195 C5orf49A4QMS7 147 aa19.32■□□□□ 0.68
TRAF4-207ENST00000461195 NDUFS8O00217 210 aa19.32■□□□□ 0.68
TRAF4-207ENST00000461195 CCNB2O95067 398 aa19.32■□□□□ 0.68
TRAF4-207ENST00000461195 IGFBP1P08833 259 aaPredicted RBP19.32■□□□□ 0.68
TRAF4-207ENST00000461195 RAP2AP10114 183 aa19.32■□□□□ 0.68
TRAF4-207ENST00000461195 SELENOVP59797 346 aa19.32■□□□□ 0.68
TRAF4-207ENST00000461195 OR2T5Q6IEZ7 315 aa19.32■□□□□ 0.68
TRAF4-207ENST00000461195 JAZF1Q86VZ6 243 aa19.32■□□□□ 0.68
TRAF4-207ENST00000461195 OR2T29Q8NH02 315 aa19.32■□□□□ 0.68
TRAF4-207ENST00000461195 C11orf40Q8WZ69 217 aa19.32■□□□□ 0.68
TRAF4-207ENST00000461195 BTBD10Q9BSF8 475 aa19.32■□□□□ 0.68
TRAF4-207ENST00000461195 MS4A5Q9H3V2 200 aa19.32■□□□□ 0.68
TRAF4-207ENST00000461195 REEP1Q9H902 201 aa19.32■□□□□ 0.68
TRAF4-207ENST00000461195 MYEF2Q9P2K5 600 aaKnown RBP19.32■□□□□ 0.68
TRAF4-207ENST00000461195 EIF3KQ9UBQ5 218 aaKnown RBP19.32■□□□□ 0.68
TRAF4-207ENST00000461195 COA3Q9Y2R0 106 aaPredicted RBP19.32■□□□□ 0.68
TRAF4-207ENST00000461195 CSPG4Q6UVK1 2322 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 A0A096LNT2 108 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 A0A1W2PPW3 197 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 LOC390937A0A1W2PQ73 354 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 IDH3BO43837 385 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 ZNF250P15622 560 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 NOS3P29474 1203 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 CRABP1P29762 137 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 KRTAP1-1Q07627 177 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 SCRN3Q0VDG4 424 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 CARTPTQ16568 116 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 ZNF770Q6IQ21 691 aaPredicted RBP19.31■□□□□ 0.68
TRAF4-207ENST00000461195 RPL13AP3Q6NVV1 102 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 ZNF774Q6NX45 483 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 DNM1P34Q6PK57 102 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 UNQ6126/PRO20091Q6UXV3 157 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 ICA1LQ8NDH6 482 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 SYNPRQ8TBG9 265 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 PIMREGQ9BSJ6 248 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 TPK1Q9H3S4 243 aa19.31■□□□□ 0.68
TRAF4-207ENST00000461195 SAMHD1Q9Y3Z3 626 aaKnown RBP19.31■□□□□ 0.68
TRAF4-207ENST00000461195 TLN2Q9Y4G6 2542 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 AQP12BA6NM10 295 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 RENP00797 406 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 TP53P04637 393 aaPredicted RBP19.3■□□□□ 0.68
TRAF4-207ENST00000461195 DAOP14920 347 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 HIST1H1CP16403 213 aaKnown RBP19.3■□□□□ 0.68
TRAF4-207ENST00000461195 ALDH3B1P43353 468 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 KLF3P57682 345 aaPredicted RBP19.3■□□□□ 0.68
TRAF4-207ENST00000461195 ERVS71-1P61550 626 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 LSM6P62312 80 aaKnown RBP19.3■□□□□ 0.68
TRAF4-207ENST00000461195 LOXL1Q08397 574 aaPredicted RBP19.3■□□□□ 0.68
TRAF4-207ENST00000461195 PPP1R8Q12972 351 aaKnown RBP19.3■□□□□ 0.68
TRAF4-207ENST00000461195 AQP6Q13520 282 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 MAD2L1BPQ15013 274 aaPredicted RBP19.3■□□□□ 0.68
TRAF4-207ENST00000461195 LEG1Q6P5S2 330 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 AQP12AQ8IXF9 295 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 OR52L1Q8NGH7 329 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 OR1J1Q8NGS3 322 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 OR4K13Q8NH42 304 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 SLC7A6OSQ96CW6 309 aaPredicted RBP19.3■□□□□ 0.68
TRAF4-207ENST00000461195 SNX18Q96RF0 628 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 NMNAT3Q96T66 252 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 EGLN3Q9H6Z9 239 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 VNN3Q9NY84 501 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 GPR160Q9UJ42 338 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 NDRG4Q9ULP0 352 aaKnown RBP19.3■□□□□ 0.68
TRAF4-207ENST00000461195 CDH10Q9Y6N8 788 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 U3KQV3 271 aa19.3■□□□□ 0.68
TRAF4-207ENST00000461195 FN1P02751 2386 aaKnown RBP19.3■□□□□ 0.68
TRAF4-207ENST00000461195 MPZL1O95297 269 aa19.29■□□□□ 0.68
TRAF4-207ENST00000461195 GASTP01350 101 aa19.29■□□□□ 0.68
TRAF4-207ENST00000461195 COX5BP10606 129 aa19.29■□□□□ 0.68
TRAF4-207ENST00000461195 WNT5AP41221 380 aa19.29■□□□□ 0.68
TRAF4-207ENST00000461195 MICAQ29983 383 aa19.29■□□□□ 0.68
TRAF4-207ENST00000461195 PGM2L1Q6PCE3 622 aa19.29■□□□□ 0.68
TRAF4-207ENST00000461195 ADGRG5Q8IZF4 528 aa19.29■□□□□ 0.68
TRAF4-207ENST00000461195 AQP11Q8NBQ7 271 aa19.29■□□□□ 0.68
TRAF4-207ENST00000461195 TSSK2Q96PF2 358 aa19.29■□□□□ 0.68
TRAF4-207ENST00000461195 CHID1Q9BWS9 393 aa19.29■□□□□ 0.68
TRAF4-207ENST00000461195 IGLV3-9A0A075B6K5 115 aa19.28■□□□□ 0.68
TRAF4-207ENST00000461195 VWC2LB2RUY7 222 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms