RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ARPC1BO15143 372 aaKnown RBP13.93□□□□□ -0.18
LMNB1-203ENST00000460265 HTR3BO95264 441 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 SNAPINO95295 136 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 SLC36A2Q495M3 483 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 FAAP20Q6NZ36 180 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 THAP6Q8TBB0 222 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 PMM1Q92871 262 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 DMRTA2Q96SC8 542 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 ADAT1Q9BUB4 502 aaKnown RBP13.93□□□□□ -0.18
LMNB1-203ENST00000460265 KCNG2Q9UJ96 466 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 NPIPA1Q9UND3 350 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 TMED7Q9Y3B3 224 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 V9GY05 133 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 ABCD3P28288 659 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 EMP2P54851 167 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 SMCO1Q147U7 214 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 TAF13Q15543 124 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.93□□□□□ -0.18
LMNB1-203ENST00000460265 MAMSTRQ6ZN01 415 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 TPRA1Q86W33 373 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 LINC00346Q8IVM7 164 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 AUNIPQ9H7T9 357 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 TMEM138Q9NPI0 162 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 RCE1Q9Y256 329 aa13.93□□□□□ -0.18
LMNB1-203ENST00000460265 A0A1B0GX78 115 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 GATCO43716 136 aaKnown RBP13.92□□□□□ -0.18
LMNB1-203ENST00000460265 EIF1BO60739 113 aaKnown RBP13.92□□□□□ -0.18
LMNB1-203ENST00000460265 RFC3P40938 356 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 EIF1P41567 113 aaKnown RBP13.92□□□□□ -0.18
LMNB1-203ENST00000460265 RAP2BP61225 183 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 METTL11BQ5VVY1 283 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 C11orf88Q6PI97 169 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 Q7L0L9 218 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 ZNF627Q7L945 461 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 CMIPQ8IY22 773 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 EID2Q8N6I1 236 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 BMPERQ8N8U9 685 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 SYNPRQ8TBG9 265 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 NRIP3Q9NQ35 241 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 LOC100509620A0A075B734 347 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 SCRG1O75711 98 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 IL33O95760 270 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 EPXP11678 715 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 NXPH1P58417 271 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 SSTP61278 116 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 ACKR1Q16570 336 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 KLHL26Q53HC5 615 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 PRAMEF20Q5VT98 475 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 SLC22A10Q63ZE4 541 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 CD200R1LQ6Q8B3 271 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 RBMS3Q6XE24 437 aaKnown RBP13.92□□□□□ -0.18
LMNB1-203ENST00000460265 OR6V1Q8N148 313 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 OR5M9Q8NGP3 310 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 ZNF417Q8TAU3 575 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 PPP1R14AQ96A00 147 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 ZNF587Q96SQ5 575 aaPredicted RBP13.92□□□□□ -0.18
LMNB1-203ENST00000460265 PTDSS2Q9BVG9 487 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 RARRES3Q9UL19 164 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 SIT1Q9Y3P8 196 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 RIF1Q5UIP0 2472 aaKnown RBP13.92□□□□□ -0.18
LMNB1-203ENST00000460265 TRBV11-1A0A0K0K1C0 115 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 G3V3Y1 287 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 LYPD3O95274 346 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 ANKRD34CP0C6C1 535 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 S100PP25815 95 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 SDHAP31040 664 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 MNDAP41218 407 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 DNASE1L1P49184 302 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 POU3F1Q03052 451 aaPredicted RBP13.92□□□□□ -0.18
LMNB1-203ENST00000460265 AVPI1Q5T686 147 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 FGF11Q92914 225 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 RTN4RQ9BZR6 473 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 CA10Q9NS85 328 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 SLC22A13Q9Y226 551 aa13.92□□□□□ -0.18
LMNB1-203ENST00000460265 SULT1C2O00338 296 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 TXNL1O43396 289 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 PTAFRP25105 342 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 CBFBQ13951 182 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 PAPD4Q6PIY7 484 aaKnown RBP13.91□□□□□ -0.18
LMNB1-203ENST00000460265 WDR89Q96FK6 387 aaPredicted RBP13.91□□□□□ -0.18
LMNB1-203ENST00000460265 IGF2P01344 180 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 CRYBA1P05813 215 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 GLB1P16278 677 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 GMFBP60983 142 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 RBMS2Q15434 407 aaKnown RBP13.91□□□□□ -0.18
LMNB1-203ENST00000460265 STX12Q86Y82 276 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 SVBPQ8N300 66 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 SLC25A45Q8N413 288 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 OR14A16Q8NHC5 309 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 FKRPQ9H9S5 495 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 ZMAT3Q9HA38 289 aaKnown RBP13.91□□□□□ -0.18
LMNB1-203ENST00000460265 MMACHCQ9Y4U1 282 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 RALGAPA1Q6GYQ0 2036 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 UCHL1P09936 223 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 RAD52P43351 418 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 BDH1Q02338 343 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 TLE3Q04726 772 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 NKAIN1Q4KMZ8 207 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 DMRTC1Q5HYR2 192 aa13.91□□□□□ -0.18
LMNB1-203ENST00000460265 DMKNQ6E0U4 476 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms