RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 POU2F3Q9UKI9 436 aa12.73□□□□□ -0.37
CLCN1-203ENST00000455478 FBXL3Q9UKT7 428 aa12.73□□□□□ -0.37
CLCN1-203ENST00000455478 EDARQ9UNE0 448 aa12.73□□□□□ -0.37
CLCN1-203ENST00000455478 TIMM10BQ9Y5J6 103 aa12.73□□□□□ -0.37
CLCN1-203ENST00000455478 USF3Q68DE3 2245 aa12.73□□□□□ -0.37
CLCN1-203ENST00000455478 RIIAD1A6NNX1 92 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 C12orf71A8MTZ7 269 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 IFNGP01579 166 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 CD8AP01732 235 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 TFP02787 698 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 HMGN1P05114 100 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 SOD3P08294 240 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 APEX1P27695 318 aaKnown RBP12.72□□□□□ -0.37
CLCN1-203ENST00000455478 PYCR1P32322 319 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 CENPAP49450 140 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 SLC25A1P53007 311 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 PCBD1P61457 104 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 ESRRGP62508 458 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 PPP2R2BQ00005 443 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 HSF2Q03933 536 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 MEP1BQ16820 701 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 SLC26A10Q8NG04 563 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 OR4F15Q8NGB8 312 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 OR9Q1Q8NGQ5 310 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 OR2T4Q8NH00 348 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 PTP4A1Q93096 173 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 MBD6Q96DN6 1003 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 DHRS9Q9BPW9 319 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 WACQ9BTA9 647 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 OSBPL10Q9BXB5 764 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 HCAR1Q9BXC0 346 aa12.72□□□□□ -0.37
CLCN1-203ENST00000455478 LOC100509620A0A075B734 347 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 IQCMA0A1B0GVH7 501 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 FAM183AA6NL82 134 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 SURF4O15260 269 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 CLUP10909 449 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 CCL2P13500 99 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 SPI1P17947 270 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 NR4A1P22736 598 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 EPHA2P29317 976 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 TTKP33981 857 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 NKX6-1P78426 367 aaPredicted RBP12.71□□□□□ -0.37
CLCN1-203ENST00000455478 TEKQ02763 1124 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 GLO1Q04760 184 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 PLP2Q04941 152 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 PTGES3Q15185 160 aaKnown RBP12.71□□□□□ -0.37
CLCN1-203ENST00000455478 ZNF774Q6NX45 483 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 PQLC1Q8N2U9 271 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 PAQR4Q8N4S7 273 aaPredicted RBP12.71□□□□□ -0.37
CLCN1-203ENST00000455478 SLC30A7Q8NEW0 376 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 OR51L1Q8NGJ5 315 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 CIB1Q99828 191 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 MED20Q9H944 212 aa12.71□□□□□ -0.37
CLCN1-203ENST00000455478 MRPL22Q9NWU5 206 aaKnown RBP12.71□□□□□ -0.37
CLCN1-203ENST00000455478 PRRC2AP48634 2157 aaKnown RBP12.7□□□□□ -0.38
CLCN1-203ENST00000455478 PTHP01270 115 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 GYPBP06028 91 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 ZNF3P17036 446 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 IGFBP5P24593 272 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 APOBEC3AP31941 199 aaPredicted RBP12.7□□□□□ -0.38
CLCN1-203ENST00000455478 POLR2IP36954 125 aaKnown RBP12.7□□□□□ -0.38
CLCN1-203ENST00000455478 FABP6P51161 128 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 HIST1H3AP68431 136 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 AQP6Q13520 282 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 DEFB113Q30KQ7 82 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 HIST2H3PS2Q5TEC6 136 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 ZNF544Q6NX49 715 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 HIST2H3AQ71DI3 136 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.7□□□□□ -0.38
CLCN1-203ENST00000455478 DTX2Q86UW9 622 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 NUP37Q8NFH4 326 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 PROKR2Q8NFJ6 384 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 PIGTQ969N2 578 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 POM121L2Q96KW2 1035 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 CCL19Q99731 98 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 RBM4BQ9BQ04 359 aaKnown RBP12.7□□□□□ -0.38
CLCN1-203ENST00000455478 TRAF4Q9BUZ4 470 aaPredicted RBP12.7□□□□□ -0.38
CLCN1-203ENST00000455478 C1orf198Q9H425 327 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 CA10Q9NS85 328 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 ASH2LQ9UBL3 628 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 LAMP3Q9UQV4 416 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 LHFPL6Q9Y693 200 aa12.7□□□□□ -0.38
CLCN1-203ENST00000455478 ARFGEF3Q5TH69 2177 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 TVP23AA6NH52 213 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 ZAR1LA6NP61 321 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 OVOL3O00110 214 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 SNAP29O95721 258 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 ALPLP05186 524 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 STOMP27105 288 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 THBS4P35443 961 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 GGT2P36268 569 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 SCRN3Q0VDG4 424 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 DAG1Q14118 895 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 ADIPOQQ15848 244 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 MST1LQ2TV78 715 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 CCDC92Q53HC0 331 aaPredicted RBP12.69□□□□□ -0.38
CLCN1-203ENST00000455478 LINC01590Q5TEZ4 76 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 SLX4IPQ5VYV7 408 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 KRT80Q6KB66 452 aa12.69□□□□□ -0.38
CLCN1-203ENST00000455478 LYPD4Q6UWN0 246 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms