RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 OR2T7P0C7T2 308 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 HOXB1P14653 301 aaPredicted RBP14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 DCKP27707 260 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 ST3GAL4Q11206 333 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 AQP6Q13520 282 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 CDSNQ15517 529 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 TBRG1Q3YBR2 411 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 KCTD21Q4G0X4 260 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 XKRXQ6PP77 449 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 AHSA2Q719I0 299 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 BHLHA15Q7RTS1 189 aaPredicted RBP14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 DPY19L4Q7Z388 723 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 SYT9Q86SS6 491 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 SKA3Q8IX90 412 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 SLC35F2Q8IXU6 374 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 ZNF808Q8N4W9 903 aaPredicted RBP14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 OR2T27Q8NH04 317 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 OTOSQ8NHW6 89 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 ITLN2Q8WWU7 325 aaPredicted RBP14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 SH3GL3Q99963 347 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 COPS4Q9BT78 406 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 GALNT8Q9NY28 637 aa14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 DIMT1Q9UNQ2 313 aaKnown RBP14.52□□□□□ -0.08
CCDC90B-202ENST00000455220 CACNA1CQ13936 2221 aa14.52□□□□□ -0.09
CCDC90B-202ENST00000455220 SPTBN1Q01082 2364 aaKnown RBP14.52□□□□□ -0.09
CCDC90B-202ENST00000455220 A0A096LPE4 126 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 A0A1W2PPZ6 126 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 C12orf71A8MTZ7 269 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 PTGES3LE9PB15 166 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 TNFAIP8O95379 198 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 ADRA2AP08913 450 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 SPARCP09486 303 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 RPS27P42677 84 aaKnown RBP14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 ACTC1P68032 377 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 ACTA1P68133 377 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 FAM27E3Q08E93 113 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 TSC22D1Q15714 1073 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 HIKESHIQ53FT3 197 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 SLC18B1Q6NT16 456 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 SLC16A14Q7RTX9 510 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 CCDC36Q8IYA8 594 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 LRRC18Q8N456 261 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 ZNF454Q8N9F8 522 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 CA5BP1Q8WTZ4 195 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 SMAP2Q8WU79 429 aaPredicted RBP14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 SGCDQ92629 289 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 FBXO17Q96EF6 278 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 TMEM80Q96HE8 168 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 CCNB1IP1Q9NPC3 277 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 ASH2LQ9UBL3 628 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 COPS3Q9UNS2 423 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 TMEM14AQ9Y6G1 99 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 FLNCQ14315 2725 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 ARPC4-TTLL3A0A0A6YYG9 625 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 FAM90A27PA6NNH2 459 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 TMCC2O75069 709 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 RAB36O95755 333 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 CDK1P06493 297 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 MMP7P09237 267 aaPredicted RBP14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 ALOX5APP20292 161 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 CCKARP32238 428 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 HIST1H3AP68431 136 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 MVKQ03426 396 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 HIST2H3PS2Q5TEC6 136 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 HIST2H3AQ71DI3 136 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 DPPA2Q7Z7J5 298 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 LINC00346Q8IVM7 164 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 STX19Q8N4C7 294 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 ACBD7Q8N6N7 88 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 OR10H4Q8NGA5 316 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 ST7LQ8TDW4 575 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 MYDGFQ969H8 173 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 ZNF649Q9BS31 505 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 CDADC1Q9BWV3 514 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 OR10A4Q9H209 315 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 ZNF696Q9H7X3 374 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 SLC17A5Q9NRA2 495 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 INPP5EQ9NRR6 644 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 POLR1DQ9Y2S0 133 aa14.51□□□□□ -0.09
CCDC90B-202ENST00000455220 ZNF503-AS2A6NEH8 195 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 OR5H1A6NKK0 313 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 HTR1AP08908 422 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 IL32P24001 234 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 C21orf33P30042 268 aaPredicted RBP14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 UGT2B10P36537 528 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 HCCSP53701 268 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 PCBD1P61457 104 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 SLC36A2Q495M3 483 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 C1QTNF12Q5T7M4 302 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 RNLSQ5VYX0 342 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 CORO6Q6QEF8 472 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 WDR31Q8NA23 367 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 STEAP2Q8NFT2 490 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 FGFBP3Q8TAT2 258 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 RNASE6Q93091 150 aaKnown RBP14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 USB1Q9BQ65 265 aaKnown RBP14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 KCNN2Q9H2S1 579 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 OBP2BQ9NPH6 170 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 B3GNT2Q9NY97 397 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms