RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 GUSBP1Q15486 140 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 RIPPLY2Q5TAB7 128 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 HIST2H3PS2Q5TEC6 136 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 TSPO2Q5TGU0 170 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 LIPNQ5VXI9 398 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 SLC18B1Q6NT16 456 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 FDX2Q6P4F2 183 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 CORO6Q6QEF8 472 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 RPTNQ6XPR3 784 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 TMEM91Q6ZNR0 172 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 GDPGP1Q6ZNW5 385 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 HIST2H3AQ71DI3 136 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 CHMP1BQ7LBR1 199 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.29□□□□□ -1.56
SDC4P-201ENST00000453285 DCXRQ7Z4W1 244 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.29□□□□□ -1.56
SDC4P-201ENST00000453285 LINC00346Q8IVM7 164 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 ALDH16A1Q8IZ83 802 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 ZNF454Q8N9F8 522 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 KDF1Q8NAX2 398 aaPredicted RBP5.29□□□□□ -1.56
SDC4P-201ENST00000453285 CPT1CQ8TCG5 803 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 SNX33Q8WV41 574 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 ASB17Q8WXJ9 295 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 ZCCHC14Q8WYQ9 949 aaKnown RBP5.29□□□□□ -1.56
SDC4P-201ENST00000453285 HTRA1Q92743 480 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 UFD1Q92890 307 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 MRPL48Q96GC5 212 aaKnown RBP5.29□□□□□ -1.56
SDC4P-201ENST00000453285 MAP6Q96JE9 813 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 PGLYRP3Q96LB9 341 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 DCLRE1CQ96SD1 692 aaKnown RBP5.29□□□□□ -1.56
SDC4P-201ENST00000453285 CHCHD6Q9BRQ6 235 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 CENPOQ9BU64 300 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 PRRG4Q9BZD6 226 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 ULBP2Q9BZM5 246 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 PRORYQ9H606 182 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 SEC61A2Q9H9S3 476 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 CALHM2Q9HA72 323 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 GPR35Q9HC97 309 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 GP6Q9HCN6 339 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 EMC7Q9NPA0 242 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 TRIM36Q9NQ86 728 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 SLC7A10Q9NS82 523 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 ACOXLQ9NUZ1 547 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 PARPBPQ9NWS1 579 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 TUBD1Q9UJT1 453 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 GNG8Q9UK08 70 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 CLEC4AQ9UMR7 237 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 STUB1Q9UNE7 303 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 NOSIPQ9Y314 301 aaKnown RBP5.29□□□□□ -1.56
SDC4P-201ENST00000453285 LHFPL6Q9Y693 200 aa5.29□□□□□ -1.56
SDC4P-201ENST00000453285 ACACBO00763 2458 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 TRDV1A0A1B0GX56 115 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 CD8B2A6NJW9 211 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 HSPB2A8KAH6 182 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 DVL2O14641 736 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 SLC22A1O15245 554 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 ZZEF1O43149 2961 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 SS18L1O75177 396 aaPredicted RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 SC5DO75845 299 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 PNPP00491 289 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 KRT8P05787 483 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 TACSTD2P09758 323 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 ZNF182P17025 639 aaPredicted RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 MSR1P21757 451 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 GALP22466 123 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 PSMA1P25786 263 aaKnown RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 AGTR1P30556 359 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 FGF9P31371 208 aaPredicted RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 GABRA5P31644 462 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 OPRL1P41146 370 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 ZNF84P51523 738 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 FOXG1P55316 489 aaPredicted RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 TAS2R43P59537 309 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 RPS11P62280 158 aaKnown RBP eCLIP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 ROR2Q01974 943 aaKnown RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 ALKBH1Q13686 389 aaKnown RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 INSL4Q14641 139 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 STK11Q15831 433 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 HSPB2Q16082 182 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 SGCAQ16586 387 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 CEACAM16Q2WEN9 425 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 ACSF3Q4G176 576 aaPredicted RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 CCDC58Q4VC31 144 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 KRTCAP3Q53RY4 240 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 FAM27BQ5VT28 67 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 NSUN5P2Q63ZY6 315 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 RTL6Q6ICC9 239 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 RPL22L1Q6P5R6 122 aaKnown RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 KCTD18Q6PI47 426 aaPredicted RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 DEGS2Q6QHC5 323 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 ARL9Q6T311 187 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 LRRN1Q6UXK5 716 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 UNQ9370/PRO34162Q6UXP9 181 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 CFAP77Q6ZQR2 320 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 SEM1Q6ZVN7 128 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 ZNF627Q7L945 461 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 ZNF679Q8IYX0 411 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 GPR137CQ8N3F9 429 aa5.28□□□□□ -1.56
SDC4P-201ENST00000453285 CISD2Q8N5K1 135 aaKnown RBP5.28□□□□□ -1.56
SDC4P-201ENST00000453285 YIPF7Q8N8F6 280 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms