RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 NTNG1Q9Y2I2 539 aa3.72□□□□□ -1.81
HMGB3P22-202ENST00000451823 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P22-202ENST00000451823 PRG3Q9Y2Y8 225 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P22-202ENST00000451823 ZNF337Q9Y3M9 751 aa3.72□□□□□ -1.81
HMGB3P22-202ENST00000451823 TCF20Q9UGU0 1960 aaKnown RBP3.72□□□□□ -1.81
HMGB3P22-202ENST00000451823 DOCK3Q8IZD9 2030 aa3.71□□□□□ -1.81
HMGB3P22-202ENST00000451823 TEX13DA0A0J9YY54 714 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 A0A1W2PPV9 198 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 KANTRA0A1W2PQU2 76 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 C9orf170A2RU37 121 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 A6NCN8 305 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 GGT3PA6NGU5 568 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 OR5H14A6NHG9 310 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 KRTAP29-1A8MX34 341 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 PRR32B1ATL7 298 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 C4orf51C9J302 202 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 MCIDASD6RGH6 385 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 NPIPB9F8W1W9 429 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 WRBO00258 174 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 PHYHO14832 338 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 TO15178 435 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 MAGEB4O15481 346 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 SEPT4O43236 478 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 PPIHO43447 177 aaKnown RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 SGCEO43556 437 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 SSX5O60225 188 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 ICOSLGO75144 302 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 PROP1O75360 226 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 UPK3AO75631 287 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 RBBP9O75884 186 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 ZFPL1O95159 310 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 APBB3O95704 486 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 AK1P00568 194 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 CD5P06127 495 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 GUSBP08236 651 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 CD14P08571 375 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 IFI6P09912 130 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 OR4E1P0C645 316 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 GKN3PP0CG01 181 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 AKAIN1P0CW23 69 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 TMIGD3P0DMS9 266 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 CLUP10909 449 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 IRF1P10914 325 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 PTHLHP12272 177 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 F3P13726 295 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 ZNF44P15621 663 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 PAX1P15863 534 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 MUC1P15941 1255 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 EPCAMP16422 314 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 ZBTB25P24278 435 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 ITPKBP27987 946 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 MAP3K8P41279 467 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 PPICP45877 212 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 GPR3P46089 330 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 SLC11A1P49279 550 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 DIO1P49895 249 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 LUMP51884 338 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 NCBP2P52298 156 aaKnown RBP eCLIP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 PDX1P52945 283 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 UCP2P55851 309 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 RGS8P57771 180 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 SNRPEP62304 92 aaKnown RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 POLR2LP62875 67 aaKnown RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 FKBP1BP68106 108 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 OC90Q02509 493 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 RELQ04864 619 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 TGM3Q08188 693 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 DMWDQ09019 674 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 PLA2G7Q13093 441 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 PDZK1IP1Q13113 114 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 LASP1Q14847 261 aaKnown RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 INPP5JQ15735 1006 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 RPE65Q16518 533 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 ARHGAP11BQ3KRB8 267 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 CDNFQ49AH0 187 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 TP53I3Q53FA7 332 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 TMEM35AQ53FP2 167 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 SLC35D3Q5M8T2 416 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 TMEM69Q5SWH9 247 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 TMEM244Q5VVB8 128 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 OR4C11Q6IEV9 310 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 H3F3CQ6NXT2 135 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 TMEM220Q6QAJ8 160 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 ENPP7Q6UWV6 458 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 CXCL17Q6UXB2 119 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 RBMS3Q6XE24 437 aaKnown RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 STAC2Q6ZMT1 411 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 ZNF793Q6ZN11 406 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 NDUFAF7Q7L592 441 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 SLC16A13Q7RTY0 426 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 HMGN2P46Q86SG4 172 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 LRRTM4Q86VH4 590 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 PARGQ86W56 976 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 TMEM173Q86WV6 379 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 ZNF547Q8IVP9 402 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 SLC35F2Q8IXU6 374 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 SLC35F3Q8IY50 421 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 ZNF595Q8IYB9 648 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 EXD3Q8N9H8 876 aa3.71□□□□□ -1.82
HMGB3P22-202ENST00000451823 TMEM229BQ8NBD8 167 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms