RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 DCTN5Q9BTE1 182 aa6.41□□□□□ -1.38
LINC01961-201ENST00000449954 KPTNQ9Y664 436 aa6.41□□□□□ -1.38
LINC01961-201ENST00000449954 NPFFO15130 113 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 TP73O15350 636 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 EIF3HO15372 352 aaKnown RBP eCLIP6.4□□□□□ -1.38
LINC01961-201ENST00000449954 OR2T1O43869 369 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 NPHS1O60500 1241 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 SEC22BO75396 215 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 SDC1P18827 310 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 MATN1P21941 496 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 CCNOP22674 350 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 PRPH2P23942 346 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 ARRB2P32121 409 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 ANP32AP39687 249 aaKnown RBP6.4□□□□□ -1.38
LINC01961-201ENST00000449954 WNT5AP41221 380 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 CSNK1A1P48729 337 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 COPZ1P61923 177 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 PPP1CBP62140 327 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 CD83Q01151 205 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 HSF2Q03933 536 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 BNIP2Q12982 314 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 KIAA0040Q15053 153 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 KCNJ8Q15842 424 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 AANATQ16613 207 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 CDONQ4KMG0 1287 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 ZNF678Q5SXM1 525 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 WBP2NLQ6ICG8 309 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 CRIP3Q6Q6R5 217 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 LHFPL2Q6ZUX7 228 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 SLC16A14Q7RTX9 510 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 VMO1Q7Z5L0 202 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 LINC00482Q8N8I6 264 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 OR5AK3PQ8NH89 298 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 FCRL1Q96LA6 429 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 TSSK3Q96PN8 268 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 SH3GL3Q99963 347 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 PTDSS2Q9BVG9 487 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 MEGF9Q9H1U4 602 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 ZMAT4Q9H898 229 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 ZNF702PQ9H963 129 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 ATAD3AQ9NVI7 634 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 TMEM38BQ9NVV0 291 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 KLHL14Q9P2G3 628 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 ERVK-18Q9QC07 812 aa6.4□□□□□ -1.38
LINC01961-201ENST00000449954 SF3B6Q9Y3B4 125 aaKnown RBP6.4□□□□□ -1.38
LINC01961-201ENST00000449954 TSSC4Q9Y5U2 329 aaPredicted RBP6.4□□□□□ -1.38
LINC01961-201ENST00000449954 NUP214P35658 2090 aaPredicted RBP6.4□□□□□ -1.39
LINC01961-201ENST00000449954 ZNF726A6NNF4 738 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 CRCPO75575 148 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 CYB5R3P00387 301 aaPredicted RBP6.39□□□□□ -1.39
LINC01961-201ENST00000449954 ALDOBP05062 364 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 PI3P19957 117 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 GSTM3P21266 225 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 VAMP1P23763 118 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 STOMP27105 288 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 SAA4P35542 130 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 SOAT1P35610 550 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 RPS5P46782 204 aaKnown RBP6.39□□□□□ -1.39
LINC01961-201ENST00000449954 ARF6P62330 175 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 SMU1Q2TAY7 513 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 UNC50Q53HI1 259 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 FAM69AQ5T7M9 428 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 C5orf46Q6UWT4 87 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 RFPL4BQ6ZWI9 263 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 H1FNTQ75WM6 255 aaPredicted RBP6.39□□□□□ -1.39
LINC01961-201ENST00000449954 OLIG3Q7RTU3 272 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 MIER2Q8N344 545 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 MIPOL1Q8TD10 442 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 ACTRT1Q8TDG2 376 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 TFAP2CQ92754 450 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 MAELQ96JY0 434 aaKnown RBP6.39□□□□□ -1.39
LINC01961-201ENST00000449954 SLC35G5Q96KT7 338 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 TMEM237Q96Q45 408 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 SSX3Q99909 188 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 EMC6Q9BV81 110 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 PCDHAC1Q9H158 963 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 C1orf109Q9NX04 203 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 MKS1Q9NXB0 559 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 ATP6V1HQ9UI12 483 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 NDRG4Q9ULP0 352 aaKnown RBP6.39□□□□□ -1.39
LINC01961-201ENST00000449954 TMED5Q9Y3A6 229 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 JRKLQ9Y4A0 524 aa6.39□□□□□ -1.39
LINC01961-201ENST00000449954 MEIOCA2RUB1 952 aa6.38□□□□□ -1.39
LINC01961-201ENST00000449954 C5orf49A4QMS7 147 aa6.38□□□□□ -1.39
LINC01961-201ENST00000449954 H3BQF6 201 aa6.38□□□□□ -1.39
LINC01961-201ENST00000449954 SLC22A3O75751 556 aa6.38□□□□□ -1.39
LINC01961-201ENST00000449954 C6orf47O95873 294 aa6.38□□□□□ -1.39
LINC01961-201ENST00000449954 ECDO95905 644 aaPredicted RBP6.38□□□□□ -1.39
LINC01961-201ENST00000449954 NCF2P19878 526 aaPredicted RBP6.38□□□□□ -1.39
LINC01961-201ENST00000449954 TAC1P20366 129 aa6.38□□□□□ -1.39
LINC01961-201ENST00000449954 PAICSP22234 425 aaKnown RBP6.38□□□□□ -1.39
LINC01961-201ENST00000449954 TUBG1P23258 451 aa6.38□□□□□ -1.39
LINC01961-201ENST00000449954 RGS6P49758 472 aa6.38□□□□□ -1.39
LINC01961-201ENST00000449954 VEGFCP49767 419 aa6.38□□□□□ -1.39
LINC01961-201ENST00000449954 GDI2P50395 445 aaKnown RBP6.38□□□□□ -1.39
LINC01961-201ENST00000449954 ARHGDIAP52565 204 aa6.38□□□□□ -1.39
LINC01961-201ENST00000449954 ACSM1Q08AH1 577 aa6.38□□□□□ -1.39
LINC01961-201ENST00000449954 PSG7Q13046 419 aa6.38□□□□□ -1.39
LINC01961-201ENST00000449954 LY6EQ16553 131 aa6.38□□□□□ -1.39
LINC01961-201ENST00000449954 LRRC75BQ2VPJ9 315 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms