RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 MYL12BO14950 172 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 LRRTM2O43300 516 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 RAD51DO75771 328 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 FARS2O95363 451 aaKnown RBP12.84□□□□□ -0.35
TNF-208ENST00000449264 CNOT4O95628 575 aaKnown RBP12.84□□□□□ -0.35
TNF-208ENST00000449264 OR2T7P0C7T2 308 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 MAP2K4P45985 399 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 CAPZA2P47755 286 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 SH3BGRP55822 239 aaPredicted RBP12.84□□□□□ -0.35
TNF-208ENST00000449264 EIF2B1Q14232 305 aaKnown RBP12.84□□□□□ -0.35
TNF-208ENST00000449264 TSC22D1Q15714 1073 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 STK11Q15831 433 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 TMEM154Q6P9G4 183 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 BEND4Q6ZU67 534 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 SPATC1Q76KD6 591 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 SSX6Q7RTT6 188 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 LIX1LQ8IVB5 337 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 RELL2Q8NC24 303 aaPredicted RBP12.84□□□□□ -0.35
TNF-208ENST00000449264 OR2T27Q8NH04 317 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 OTOSQ8NHW6 89 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 THEM6Q8WUY1 208 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 SIGLEC11Q96RL6 698 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 ALG8Q9BVK2 526 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 CHCHD3Q9NX63 227 aaKnown RBP12.84□□□□□ -0.35
TNF-208ENST00000449264 ERVK13-1Q9NX77 482 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 LHFPL6Q9Y693 200 aa12.84□□□□□ -0.35
TNF-208ENST00000449264 CIB4A0PJX0 185 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 PSMD9O00233 223 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 TMCC2O75069 709 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 LIMS3P0CW19 117 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 LIMS4P0CW20 117 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 OR8G3PP0DMU2 310 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 CD79BP40259 229 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 LSM6P62312 80 aaKnown RBP12.83□□□□□ -0.35
TNF-208ENST00000449264 ZNF85Q03923 595 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 ENDOGQ14249 297 aaKnown RBP12.83□□□□□ -0.35
TNF-208ENST00000449264 KCNMB1Q16558 191 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 HIKESHIQ53FT3 197 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 SLC18B1Q6NT16 456 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 ZNF474Q6S9Z5 364 aaPredicted RBP12.83□□□□□ -0.35
TNF-208ENST00000449264 SLC16A14Q7RTX9 510 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 DCXRQ7Z4W1 244 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 CXorf67Q86X51 503 aaPredicted RBP12.83□□□□□ -0.35
TNF-208ENST00000449264 SPARTQ8N0X7 666 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 GABRG1Q8N1C3 465 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 OR1K1Q8NGR3 316 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 OR2AJ1Q8NGZ0 328 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 CCDC120Q96HB5 630 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 AMELYQ99218 206 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 PIGMQ9H3S5 423 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 INPP5EQ9NRR6 644 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 CYB5R1Q9UHQ9 305 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 ERGIC3Q9Y282 383 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 TMEM14AQ9Y6G1 99 aa12.83□□□□□ -0.35
TNF-208ENST00000449264 MSTNO14793 375 aa12.83□□□□□ -0.36
TNF-208ENST00000449264 MAGEB4O15481 346 aaPredicted RBP12.83□□□□□ -0.36
TNF-208ENST00000449264 WNT11O96014 354 aa12.83□□□□□ -0.36
TNF-208ENST00000449264 PTHP01270 115 aa12.83□□□□□ -0.36
TNF-208ENST00000449264 PATE4P0C8F1 98 aa12.83□□□□□ -0.36
TNF-208ENST00000449264 COX5AP20674 150 aa12.83□□□□□ -0.36
TNF-208ENST00000449264 TGFBR3Q03167 851 aa12.83□□□□□ -0.36
TNF-208ENST00000449264 NEDD8Q15843 81 aa12.83□□□□□ -0.36
TNF-208ENST00000449264 FAM27BQ5VT28 67 aa12.83□□□□□ -0.36
TNF-208ENST00000449264 ZNF322Q6U7Q0 402 aaPredicted RBP12.83□□□□□ -0.36
TNF-208ENST00000449264 SKA3Q8IX90 412 aa12.83□□□□□ -0.36
TNF-208ENST00000449264 SVOPQ8N4V2 548 aa12.83□□□□□ -0.36
TNF-208ENST00000449264 CDCA4Q9BXL8 241 aa12.83□□□□□ -0.36
TNF-208ENST00000449264 MRPS26Q9BYN8 205 aaKnown RBP12.83□□□□□ -0.36
TNF-208ENST00000449264 SCOCQ9UIL1 159 aa12.83□□□□□ -0.36
TNF-208ENST00000449264 GDF2Q9UK05 429 aaPredicted RBP12.83□□□□□ -0.36
TNF-208ENST00000449264 IKZF2Q9UKS7 526 aa12.83□□□□□ -0.36
TNF-208ENST00000449264 A0A1B0GUH1 482 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 PRR32B1ATL7 298 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 RER1O15258 196 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 MRPS14O60783 128 aaKnown RBP12.82□□□□□ -0.36
TNF-208ENST00000449264 CST2P09228 141 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 ALOX5APP20292 161 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 TUBA1BP68363 451 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 TUBA4AP68366 448 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 ADORA2A-AS1P86434 159 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 AQP6Q13520 282 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 IRF3Q14653 427 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 PCK2Q16822 640 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 TEX30Q5JUR7 227 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 OR2G6Q5TZ20 316 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 ANKRD16Q6P6B7 361 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 CFAP77Q6ZQR2 320 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 KCTD8Q6ZWB6 473 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 TUBA1AQ71U36 451 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 MRGPRGQ86SM5 289 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 KLHL36Q8N4N3 616 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 ZNF433Q8N7K0 673 aaPredicted RBP12.82□□□□□ -0.36
TNF-208ENST00000449264 ZNF454Q8N9F8 522 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 OR52N5Q8NH56 324 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 SNX33Q8WV41 574 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 FBXO17Q96EF6 278 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 MAP6Q96JE9 813 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 MNTQ99583 582 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 ABHD6Q9BV23 337 aa12.82□□□□□ -0.36
TNF-208ENST00000449264 MND1Q9BWT6 205 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms