RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 ASB9Q96DX5 294 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 SAMD8Q96LT4 415 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 TRIM15Q9C019 465 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 NUAK2Q9H093 628 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 C2CD3Q4AC94 2353 aa10.94□□□□□ -0.66
PRPF40A-203ENST00000448428 LOC390937A0A1W2PQ73 354 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 C5orf49A4QMS7 147 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 VWC2LB2RUY7 222 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 M0R233 179 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 DCTN6O00399 190 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 ARPC3O15145 178 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 GASTP01350 101 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 ERCC1P07992 297 aaPredicted RBP10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 DAOP14920 347 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 ZNF250P15622 560 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 WNT5AP41221 380 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 GDI2P50395 445 aaKnown RBP10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 LOXL1Q08397 574 aaPredicted RBP10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 TRAP1Q12931 704 aaKnown RBP10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 MAD2L1BPQ15013 274 aaPredicted RBP10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 CARTPTQ16568 116 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 FAM98BQ52LJ0 330 aaKnown RBP10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 OR2T5Q6IEZ7 315 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 ZNF770Q6IQ21 691 aaPredicted RBP10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 PGM2L1Q6PCE3 622 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 GLB1L2Q8IW92 636 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 ZNF101Q8IZC7 436 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 OR9Q2Q8NGE9 314 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 OR2T29Q8NH02 315 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 C11orf40Q8WZ69 217 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 SLC7A6OSQ96CW6 309 aaPredicted RBP10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 LRGUKQ96M69 825 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 TSSK2Q96PF2 358 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 BTBD10Q9BSF8 475 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 IFT27Q9BW83 186 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 BCL2L14Q9BZR8 327 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 TPK1Q9H3S4 243 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 MS4A5Q9H3V2 200 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 SRA1Q9HD15 236 aaKnown RBP10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 MYOZ1Q9NP98 299 aaPredicted RBP10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 VNN3Q9NY84 501 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 EIF3KQ9UBQ5 218 aaKnown RBP10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 CSPG4Q6UVK1 2322 aa10.93□□□□□ -0.66
PRPF40A-203ENST00000448428 ABCA1O95477 2261 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 SETD2Q9BYW2 2564 aaPredicted RBP10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 NDUFS8O00217 210 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 GYG2O15488 501 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 CCNB2O95067 398 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 STAMBPO95630 424 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 GPANK1O95872 356 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 NAT2P11245 290 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 HIST1H1CP16403 213 aaKnown RBP10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 USF1P22415 310 aaPredicted RBP10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 NR4A2P43354 598 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 DBPQ10586 325 aaPredicted RBP10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 ZNF620Q6ZNG0 422 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 OR6V1Q8N148 313 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 LINC00471Q8N535 108 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 ICA1LQ8NDH6 482 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 OR1J1Q8NGS3 322 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 OR4K13Q8NH42 304 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 SYNPRQ8TBG9 265 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 UBASH3BQ8TF42 649 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 POP5Q969H6 163 aaKnown RBP10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 NMNAT3Q96T66 252 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 WACQ9BTA9 647 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 EGLN3Q9H6Z9 239 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 TAAR3PQ9P1P4 343 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 B9D1Q9UPM9 204 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 U3KQV3 271 aa10.92□□□□□ -0.66
PRPF40A-203ENST00000448428 IGLV3-9A0A075B6K5 115 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 IGLV1-36A0A0B4J1U3 117 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 A0A1W2PPW3 197 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 INAFM1C9JVW0 142 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 LYNX1G3V0Z9 82 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 IDH3BO43837 385 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 CD5LO43866 347 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 RENP00797 406 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 NGFP01138 241 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 TP53P04637 393 aaPredicted RBP10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 LYNX1P0DP58 116 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 RAP2AP10114 183 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 GIFP27352 417 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 NOS3P29474 1203 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 CRABP1P29762 137 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 CENPAP49450 140 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 KLF3P57682 345 aaPredicted RBP10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 SELENOVP59797 346 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 LSM6P62312 80 aaKnown RBP10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 SCRN3Q0VDG4 424 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 KCNMB1Q16558 191 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 MICAQ29983 383 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 TMEM249Q2WGJ8 235 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 ALKBH6Q3KRA9 238 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 CLEC12AQ5QGZ9 265 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 SLC35F1Q5T1Q4 408 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 LEG1Q6P5S2 330 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 JAZF1Q86VZ6 243 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 ADGRG5Q8IZF4 528 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 ZNF786Q8N393 782 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms