RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 LIMS1P48059 325 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 KRR1Q13601 381 aaKnown RBP17.19■□□□□ 0.34
LRCH3-208ENST00000443727 SEC23BQ15437 767 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 PCGF3Q3KNV8 242 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 ZNF718Q3SXZ3 478 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 MESTQ5EB52 335 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 ELFN2Q5R3F8 820 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 SPATA46Q5T0L3 261 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 ZNF774Q6NX45 483 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 FOXL2NBQ6ZUU3 175 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 DEFB107AQ8IZN7 70 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 HPS1Q92902 700 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 RASD2Q96D21 266 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 EMC7Q9NPA0 242 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 IL20RAQ9UHF4 553 aa17.19■□□□□ 0.34
LRCH3-208ENST00000443727 ATRQ13535 2644 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 C17orf100A8MU93 164 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 ARPC2O15144 300 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 TPD52L2O43399 206 aaKnown RBP17.18■□□□□ 0.34
LRCH3-208ENST00000443727 LILRA1O75019 489 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 PTP4A3O75365 173 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 GADD45GO95257 159 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 FAM157CP0CG43 387 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 HNF1AP20823 631 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 ACHEP22303 614 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 COL8A2P25067 703 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 SDHAP31040 664 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 WNT5AP41221 380 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 GPR6P46095 362 aaPredicted RBP17.18■□□□□ 0.34
LRCH3-208ENST00000443727 MNAT1P51948 309 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 CCL8P80075 99 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 ENDOGQ14249 297 aaKnown RBP17.18■□□□□ 0.34
LRCH3-208ENST00000443727 TRIP10Q15642 601 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 ARL9Q6T311 187 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 FAM122BQ7Z309 247 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 ZNF101Q8IZC7 436 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 ABHD4Q8TB40 342 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 MDFIQ99750 246 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 CD300AQ9UGN4 299 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 IER3IP1Q9Y5U9 82 aa17.18■□□□□ 0.34
LRCH3-208ENST00000443727 SOCS2O14508 198 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 PPIHO43447 177 aaKnown RBP17.17■□□□□ 0.34
LRCH3-208ENST00000443727 SLC16A7O60669 478 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 FABP3P05413 133 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 CTLA4P16410 223 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 MAGEB1P43366 347 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 RPS6KA3P51812 740 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 ARHGDIAP52565 204 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 MRPS11P82912 194 aaKnown RBP17.17■□□□□ 0.34
LRCH3-208ENST00000443727 SCRN3Q0VDG4 424 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 CCNIQ14094 377 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 SMARCD3Q6STE5 483 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 UGT2A3Q6UWM9 527 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 THSD4Q6ZMP0 1018 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 DPY19L2P2Q6ZN68 376 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 SYT9Q86SS6 491 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 ADCK1Q86TW2 530 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 DHRS1Q96LJ7 313 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 WACQ9BTA9 647 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 SYT4Q9H2B2 425 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 NARFLQ9H6Q4 476 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 ELOVL3Q9HB03 270 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 NRIP3Q9NQ35 241 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 DECR2Q9NUI1 292 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 NDRG4Q9ULP0 352 aaKnown RBP17.17■□□□□ 0.34
LRCH3-208ENST00000443727 TMCC3Q9ULS5 477 aa17.17■□□□□ 0.34
LRCH3-208ENST00000443727 YLPM1P49750 1951 aaKnown RBP17.17■□□□□ 0.34
LRCH3-208ENST00000443727 PLSCR5A0PG75 271 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 OR10H3O60404 316 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 CDC14BO60729 498 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 KHDRBS3O75525 346 aaKnown RBP17.16■□□□□ 0.34
LRCH3-208ENST00000443727 NCR1O76036 304 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 IGHV3-13P01766 116 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 SCG5P05408 212 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 IGFBP5P24593 272 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 IL2RGP31785 369 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 IFNGR2P38484 337 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 CENPAP49450 140 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 TMEM33P57088 247 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 PPP1CBP62140 327 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 SPATS1Q496A3 300 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 FAM120AOSQ5T036 256 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 GLB1L2Q8IW92 636 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 C1orf174Q8IYL3 243 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 LINC01356Q8N9X3 169 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 SLC25A40Q8TBP6 338 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 FANK1Q8TC84 345 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 GPX7Q96SL4 187 aaPredicted RBP17.16■□□□□ 0.34
LRCH3-208ENST00000443727 SOX7Q9BT81 388 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 OR2J1Q9GZK6 312 aa17.16■□□□□ 0.34
LRCH3-208ENST00000443727 ZNF275Q9NSD4 429 aaPredicted RBP17.16■□□□□ 0.34
LRCH3-208ENST00000443727 DOK2O60496 412 aa17.15■□□□□ 0.34
LRCH3-208ENST00000443727 SEMG1P04279 462 aa17.15■□□□□ 0.34
LRCH3-208ENST00000443727 HTR5AP47898 357 aa17.15■□□□□ 0.34
LRCH3-208ENST00000443727 ZNF81P51508 661 aa17.15■□□□□ 0.34
LRCH3-208ENST00000443727 TSTQ16762 297 aaKnown RBP17.15■□□□□ 0.34
LRCH3-208ENST00000443727 RFPL4BQ6ZWI9 263 aa17.15■□□□□ 0.34
LRCH3-208ENST00000443727 IPCEF1Q8WWN9 437 aaPredicted RBP17.15■□□□□ 0.34
LRCH3-208ENST00000443727 YIPF5Q969M3 257 aa17.15■□□□□ 0.34
LRCH3-208ENST00000443727 MARS2Q96GW9 593 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms