RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 MUC15Q8N387 334 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 PARP8Q8N3A8 854 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 SLC37A3Q8NCC5 494 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 NPEPL1Q8NDH3 523 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 FGFBP3Q8TAT2 258 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 HTRA1Q92743 480 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 FBXO17Q96EF6 278 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 TRMT61AQ96FX7 289 aaKnown RBP9.39□□□□□ -0.91
HDAC6-211ENST00000443563 MS4A3Q96HJ5 214 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 ZNF416Q9BWM5 594 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 PRRG3Q9BZD7 231 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 GABARAPL1Q9H0R8 117 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 ZNF442Q9H7R0 627 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 CA10Q9NS85 328 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 KRT84Q9NSB2 600 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 CBLN4Q9NTU7 201 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 POLR1DQ9Y2S0 133 aa9.39□□□□□ -0.91
HDAC6-211ENST00000443563 HLA-DQA2P01906 255 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 IGFBP1P08833 259 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-211ENST00000443563 ZNF35P13682 527 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 PAX1P15863 534 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 NR4A1P22736 598 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 STOMP27105 288 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 PCSK6P29122 969 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 RAD52P43351 418 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 GDI2P50395 445 aaKnown RBP9.38□□□□□ -0.91
HDAC6-211ENST00000443563 DAPP51397 102 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 SLC25A1P53007 311 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 CDK5Q00535 292 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 PSG4Q00888 419 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 ENDOGQ14249 297 aaKnown RBP9.38□□□□□ -0.91
HDAC6-211ENST00000443563 GINS1Q14691 196 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 ZSCAN26Q16670 478 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 B3GLCTQ6Y288 498 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 C1orf174Q8IYL3 243 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 PROKR2Q8NFJ6 384 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 GJC3Q8NFK1 279 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 OR4Q3Q8NH05 313 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 IGFBPL1Q8WX77 278 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 C11orf40Q8WZ69 217 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 STMN2Q93045 179 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 PLEKHA8Q96JA3 519 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 TSSK2Q96PF2 358 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 TRAF4Q9BUZ4 470 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-211ENST00000443563 CDADC1Q9BWV3 514 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 OR2H1Q9GZK4 316 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 CXXC4Q9H2H0 198 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 SLC25A19Q9HC21 320 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 EMC7Q9NPA0 242 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 EIF3KQ9UBQ5 218 aaKnown RBP9.38□□□□□ -0.91
HDAC6-211ENST00000443563 ATPIF1Q9UII2 106 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 KCNG2Q9UJ96 466 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 NDRG4Q9ULP0 352 aaKnown RBP9.38□□□□□ -0.91
HDAC6-211ENST00000443563 CMAHPQ9Y471 501 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 PMF1-BGLAPU3KQ54 211 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 SPG11Q96JI7 2443 aa9.38□□□□□ -0.91
HDAC6-211ENST00000443563 CADP27708 2225 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 B9A039 149 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 PRR23D1E9PI22 279 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-211ENST00000443563 OVOL3O00110 214 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 DCTN6O00399 190 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 SGCEO43556 437 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 SCG5P05408 212 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 SOD3P08294 240 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 PRR23D2P0DMB1 279 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-211ENST00000443563 GAAP10253 952 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 ZNF823P16415 610 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 IGFBP5P24593 272 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 APEX1P27695 318 aaKnown RBP9.37□□□□□ -0.91
HDAC6-211ENST00000443563 FMO3P31513 532 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 GLRXP35754 106 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 SERPINF1P36955 418 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 CRISP1P54107 249 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 NKX6-1P78426 367 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-211ENST00000443563 TEKQ02763 1124 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 HGFACQ04756 655 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 SNTB2Q13425 540 aaKnown RBP9.37□□□□□ -0.91
HDAC6-211ENST00000443563 CRMP1Q14194 572 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 ZNF362Q5T0B9 420 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-211ENST00000443563 SHEQ5VZ18 495 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 KDM4DQ6B0I6 523 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 KRT80Q6KB66 452 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 VHLLQ6RSH7 139 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 UGT2A3Q6UWM9 527 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 CYB561A3Q8NBI2 242 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 ICA1LQ8NDH6 482 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 CPEB3Q8NE35 698 aaKnown RBP9.37□□□□□ -0.91
HDAC6-211ENST00000443563 SLC26A10Q8NG04 563 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 OR2AJ1Q8NGZ0 328 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 AKR7LQ8NHP1 331 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 IPCEF1Q8WWN9 437 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-211ENST00000443563 FOXN4Q96NZ1 517 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 DDOQ99489 341 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 RBM4BQ9BQ04 359 aaKnown RBP9.37□□□□□ -0.91
HDAC6-211ENST00000443563 RBM4Q9BWF3 364 aaKnown RBP9.37□□□□□ -0.91
HDAC6-211ENST00000443563 GSX2Q9BZM3 304 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 BCL2L14Q9BZR8 327 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 WNT5BQ9H1J7 359 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 SEMA6AQ9H2E6 1030 aa9.37□□□□□ -0.91
HDAC6-211ENST00000443563 FN3KQ9H479 309 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms