RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 MAVSQ7Z434 540 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 TSPYL5Q86VY4 417 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-208ENST00000443046 ARMC8Q8IUR7 673 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 MUC20Q8N307 709 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-208ENST00000443046 TMEM86BQ8N661 226 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 OR10S1Q8NGN2 331 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 THOC1Q96FV9 657 aaKnown RBP12.04□□□□□ -0.48
HMGN1-208ENST00000443046 C4orf45Q96LM5 186 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 SSBP3Q9BWW4 388 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-208ENST00000443046 CHIAQ9BZP6 476 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 OR2H1Q9GZK4 316 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 KCNN2Q9H2S1 579 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 IKZF5Q9H5V7 419 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 CCNB1IP1Q9NPC3 277 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 NOX4Q9NPH5 578 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 IL19Q9UHD0 177 aa12.04□□□□□ -0.48
HMGN1-208ENST00000443046 M0R3H8 397 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 UBDO15205 165 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 TGDSO95455 350 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 SLC2A10O95528 541 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 HIST1H2ABP04908 130 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 KITLGP21583 273 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 SLC6A2P23975 617 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 MRPL19P49406 292 aaKnown RBP12.03□□□□□ -0.48
HMGN1-208ENST00000443046 PCBP3P57721 371 aaKnown RBP12.03□□□□□ -0.48
HMGN1-208ENST00000443046 BPIFB3P59826 476 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 RPL15P61313 204 aaKnown RBP12.03□□□□□ -0.48
HMGN1-208ENST00000443046 RPL18Q07020 188 aaKnown RBP12.03□□□□□ -0.48
HMGN1-208ENST00000443046 HLXQ14774 488 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-208ENST00000443046 DUSP7Q16829 419 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 ENTPD8Q5MY95 495 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 BTNL3Q6UXE8 466 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 HIST3H2AQ7L7L0 130 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 ZER1Q7Z7L7 766 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 GPR32P1Q8NGA4 272 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 OR6T1Q8NGN1 323 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 C10orf82Q8WW14 230 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 ITLN1Q8WWA0 313 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 HIST1H2ACQ93077 130 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 MPP4Q96JB8 637 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 OR52B2Q96RD2 323 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 NANOGQ9H9S0 305 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 TMEM165Q9HC07 324 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 GCM1Q9NP62 436 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 MEPEQ9NQ76 525 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-208ENST00000443046 MAN2C1Q9NTJ4 1040 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 THAP1Q9NVV9 213 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 VAPAQ9P0L0 249 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 SLC13A4Q9UKG4 626 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 PPP1R3CQ9UQK1 317 aa12.03□□□□□ -0.48
HMGN1-208ENST00000443046 A0A1W2PRG6 482 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 SLC22A31A6NKX4 558 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 CPSF4LA6NMK7 179 aaKnown RBP12.02□□□□□ -0.49
HMGN1-208ENST00000443046 BLOC1S5-TXNDC5H3BN57 136 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 TIMM8AO60220 97 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-208ENST00000443046 FSTL3O95633 263 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 F13BP05160 661 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 CRYBA1P05813 215 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 CST2P09228 141 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 KITP10721 976 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 TUBG1P23258 451 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 TNFSF4P23510 183 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 AQP1P29972 269 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 MMP16P51512 607 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 ARHGDIAP52565 204 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 ERVK-25P63136 954 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 TAF9Q16594 264 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 SLC25A47Q6Q0C1 308 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 BRD3OSQ6XYD6 125 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 HDDC2Q7Z4H3 204 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 NANOGNBQ7Z5D8 188 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 KLBQ86Z14 1044 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 C1QL4Q86Z23 238 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 RBM45Q8IUH3 476 aaKnown RBP12.02□□□□□ -0.49
HMGN1-208ENST00000443046 FUNDC1Q8IVP5 155 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 SMYD1Q8NB12 490 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 OR2Z1Q8NG97 314 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 OR4D11Q8NGI4 311 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 ADAMTS16Q8TE57 1224 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 AENQ8WTP8 325 aaKnown RBP12.02□□□□□ -0.49
HMGN1-208ENST00000443046 ZDHHC16Q969W1 377 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 PRSS27Q9BQR3 290 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 PCDHAC1Q9H158 963 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 POFUT1Q9H488 388 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 MARCH7Q9H992 704 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 ELOVL3Q9HB03 270 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 TUBG2Q9NRH3 451 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-208ENST00000443046 POMT1Q9Y6A1 747 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 COL7A1Q02388 2944 aa12.02□□□□□ -0.49
HMGN1-208ENST00000443046 NPIPB13A6NJU9 1138 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 NPIPB4C9JG80 1138 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 IFNL4K9M1U5 179 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 KPNA4O00629 521 aaPredicted RBP12.01□□□□□ -0.49
HMGN1-208ENST00000443046 MELTFP08582 738 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 PPIBP23284 216 aaKnown RBP12.01□□□□□ -0.49
HMGN1-208ENST00000443046 DAP3P51398 398 aaKnown RBP12.01□□□□□ -0.49
HMGN1-208ENST00000443046 PROK1P58294 105 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 VSNL1P62760 191 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 FMODQ06828 376 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms