RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 ZNF101Q8IZC7 436 aa11.71□□□□□ -0.53
PTPRE-203ENST00000442830 KLHL36Q8N4N3 616 aa11.71□□□□□ -0.53
PTPRE-203ENST00000442830 PFN4Q8NHR9 129 aa11.71□□□□□ -0.53
PTPRE-203ENST00000442830 ABHD4Q8TB40 342 aa11.71□□□□□ -0.53
PTPRE-203ENST00000442830 SLC25A40Q8TBP6 338 aa11.71□□□□□ -0.53
PTPRE-203ENST00000442830 LZICQ8WZA0 190 aa11.71□□□□□ -0.53
PTPRE-203ENST00000442830 NMD3Q96D46 503 aaKnown RBP11.71□□□□□ -0.53
PTPRE-203ENST00000442830 OR2H1Q9GZK4 316 aa11.71□□□□□ -0.53
PTPRE-203ENST00000442830 OR2J1Q9GZK6 312 aa11.71□□□□□ -0.53
PTPRE-203ENST00000442830 MAN2C1Q9NTJ4 1040 aa11.71□□□□□ -0.53
PTPRE-203ENST00000442830 AP3M1Q9Y2T2 418 aa11.71□□□□□ -0.53
PTPRE-203ENST00000442830 POLR3KQ9Y2Y1 108 aaPredicted RBP11.71□□□□□ -0.53
PTPRE-203ENST00000442830 NPTNQ9Y639 398 aa11.71□□□□□ -0.53
PTPRE-203ENST00000442830 MGAM2Q2M2H8 2515 aa11.71□□□□□ -0.53
PTPRE-203ENST00000442830 LOC100509620A0A075B734 347 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 AHCYL1O43865 530 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 TIMM8AO60220 97 aaPredicted RBP11.7□□□□□ -0.54
PTPRE-203ENST00000442830 FSHBP01225 129 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 MAKP20794 623 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 CDAP32320 146 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 WNT5AP41221 380 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 SLC9A3P48764 834 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 GZMMP51124 257 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 SCRN3Q0VDG4 424 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 TMEM155Q4W5P6 130 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 ARMCX4Q5H9R4 360 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 FOXL2NBQ6ZUU3 175 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 TSPYL5Q86VY4 417 aaPredicted RBP11.7□□□□□ -0.54
PTPRE-203ENST00000442830 CALHM3Q86XJ0 350 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 PCYOX1LQ8NBM8 494 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 NSMAFQ92636 917 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 HDAC2Q92769 488 aaKnown RBP11.7□□□□□ -0.54
PTPRE-203ENST00000442830 LRRC58Q96CX6 371 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 BPIFA2Q96DR5 249 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 C4orf45Q96LM5 186 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 SAMD8Q96LT4 415 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 PRRC1Q96M27 445 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 SLC6A7Q99884 636 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 MRI1Q9BV20 369 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 TBCCD1Q9NVR7 557 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 GID8Q9NWU2 228 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 DOCK11Q5JSL3 2073 aa11.7□□□□□ -0.54
PTPRE-203ENST00000442830 ABHD16AO95870 558 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 AVPP01185 164 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 MPV17P39210 176 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 CRYBA2P53672 197 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 UBA52P62987 128 aaKnown RBP11.69□□□□□ -0.54
PTPRE-203ENST00000442830 ERVK-25P63136 954 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 TNFAIP6P98066 277 aaPredicted RBP11.69□□□□□ -0.54
PTPRE-203ENST00000442830 CDK5R2Q13319 367 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 PIN1Q13526 163 aaPredicted RBP11.69□□□□□ -0.54
PTPRE-203ENST00000442830 AWAT1Q58HT5 328 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 SPATA46Q5T0L3 261 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 SHISA2Q6UWI4 295 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 RFPL4BQ6ZWI9 263 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 MUC20Q8N307 709 aaPredicted RBP11.69□□□□□ -0.54
PTPRE-203ENST00000442830 FAM156AQ8NDB6 213 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 AKR7LQ8NHP1 331 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 MOSPD2Q8NHP6 518 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 WNT5BQ9H1J7 359 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 NPHS2Q9NP85 383 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 C20orf141Q9NUB4 165 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 UBAP1Q9NZ09 502 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 ATPIF1Q9UII2 106 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 KLHL21Q9UJP4 597 aa11.69□□□□□ -0.54
PTPRE-203ENST00000442830 ARHGAP32A7KAX9 2087 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 A0A0G2JND7 137 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 ZSCAN5BA6NJL1 495 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 A8MXK9 166 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 FAM220BPB1ANY3 271 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 EDF1O60869 148 aaKnown RBP11.68□□□□□ -0.54
PTPRE-203ENST00000442830 RGS9O75916 674 aaPredicted RBP11.68□□□□□ -0.54
PTPRE-203ENST00000442830 IGHV2-70P01814 119 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 IFI30P13284 250 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 LAP3P28838 519 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 CTXN1P60606 82 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 LCN2P80188 198 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 FMODQ06828 376 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 TOP3AQ13472 1001 aaPredicted RBP11.68□□□□□ -0.54
PTPRE-203ENST00000442830 SLC27A4Q6P1M0 643 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 RNF113BQ8IZP6 322 aaKnown RBP11.68□□□□□ -0.54
PTPRE-203ENST00000442830 ZNF283Q8N7M2 679 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 GTF3AQ92664 365 aaKnown RBP11.68□□□□□ -0.54
PTPRE-203ENST00000442830 TMEM106BQ9NUM4 274 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 PLEK2Q9NYT0 353 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 IL19Q9UHD0 177 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 IL20RAQ9UHF4 553 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 PURGQ9UJV8 347 aaKnown RBP11.68□□□□□ -0.54
PTPRE-203ENST00000442830 NUP50Q9UKX7 468 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 CACNG2Q9Y698 323 aa11.68□□□□□ -0.54
PTPRE-203ENST00000442830 A0A1W2PPL8 197 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 XKRYO14609 159 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 PPIAL4GP0DN37 164 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 HKR1P10072 659 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 TROVE2P10155 538 aaKnown RBP eCLIP11.67□□□□□ -0.54
PTPRE-203ENST00000442830 EGR1P18146 543 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 KITLGP21583 273 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 RGS6P49758 472 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 SELENOWP63302 87 aa11.67□□□□□ -0.54
PTPRE-203ENST00000442830 LAPTM4AQ15012 233 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms