RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 E9PQ18 207 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 HS3ST1O14792 307 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 RAB36O95755 333 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 IFNGP01579 166 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 HMGN1P05114 100 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 SERPINA5P05154 406 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 ZNF3P17036 446 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 PAX7P23759 505 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 GUCA1AP43080 201 aaPredicted RBP13.89□□□□□ -0.19
USP39-205ENST00000442708 ALDH3A2P51648 485 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 EFNB1P98172 346 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 HSF2Q03933 536 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 HGFACQ04756 655 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 ZIK1Q3SY52 487 aaPredicted RBP13.89□□□□□ -0.19
USP39-205ENST00000442708 LINC01590Q5TEZ4 76 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 TMEM53Q6P2H8 277 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 SLC22A25Q6T423 547 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 DPPA2Q7Z7J5 298 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 PAQR4Q8N4S7 273 aaPredicted RBP13.89□□□□□ -0.19
USP39-205ENST00000442708 PROKR2Q8NFJ6 384 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 BBS1Q8NFJ9 593 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 OR2T4Q8NH00 348 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 MBOAT4Q96T53 435 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 C9orf16Q9BUW7 83 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 OR2H1Q9GZK4 316 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 RIBC2Q9H4K1 309 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 UBTD1Q9HAC8 227 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 MOV10Q9HCE1 1003 aaKnown RBP13.89□□□□□ -0.19
USP39-205ENST00000442708 CCNB1IP1Q9NPC3 277 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 TVP23BQ9NYZ1 205 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 NKX1-2Q9UD57 310 aaPredicted RBP13.89□□□□□ -0.19
USP39-205ENST00000442708 LHFPL6Q9Y693 200 aa13.89□□□□□ -0.19
USP39-205ENST00000442708 CSMD2Q7Z408 3487 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 C12orf71A8MTZ7 269 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 PRKYO43930 277 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 CCL2P13500 99 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 ZNF35P13682 527 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 APEX1P27695 318 aaKnown RBP13.88□□□□□ -0.19
USP39-205ENST00000442708 CDH11P55287 796 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 LSM6P62312 80 aaKnown RBP13.88□□□□□ -0.19
USP39-205ENST00000442708 TEKQ02763 1124 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 GLO1Q04760 184 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 LPCAT4Q643R3 524 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 ZNF774Q6NX45 483 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 PLBD1Q6P4A8 553 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 ZBTB49Q6ZSB9 765 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 CPOQ8IVL8 374 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 ZNF511Q8NB15 262 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 OTULINQ96BN8 352 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 RADILQ96JH8 1075 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 KCNN2Q9H2S1 579 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 NOTCH2Q04721 2471 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 DSCAMO60469 2012 aa13.88□□□□□ -0.19
USP39-205ENST00000442708 LOC100509620A0A075B734 347 aa13.87□□□□□ -0.19
USP39-205ENST00000442708 PRR23D1E9PI22 279 aaPredicted RBP13.87□□□□□ -0.19
USP39-205ENST00000442708 CRYAAP02489 173 aa13.87□□□□□ -0.19
USP39-205ENST00000442708 PRR23D2P0DMB1 279 aaPredicted RBP13.87□□□□□ -0.19
USP39-205ENST00000442708 GGT2P36268 569 aa13.87□□□□□ -0.19
USP39-205ENST00000442708 RPS27P42677 84 aaKnown RBP13.87□□□□□ -0.19
USP39-205ENST00000442708 SNAPC1Q16533 368 aa13.87□□□□□ -0.19
USP39-205ENST00000442708 CCDC92Q53HC0 331 aaPredicted RBP13.87□□□□□ -0.19
USP39-205ENST00000442708 CORO6Q6QEF8 472 aa13.87□□□□□ -0.19
USP39-205ENST00000442708 BCDIN3DQ7Z5W3 292 aaKnown RBP13.87□□□□□ -0.19
USP39-205ENST00000442708 SYT9Q86SS6 491 aa13.87□□□□□ -0.19
USP39-205ENST00000442708 LINC00346Q8IVM7 164 aa13.87□□□□□ -0.19
USP39-205ENST00000442708 EME1Q96AY2 570 aa13.87□□□□□ -0.19
USP39-205ENST00000442708 TOR3AQ9H497 397 aa13.87□□□□□ -0.19
USP39-205ENST00000442708 WDR76Q9H967 626 aa13.87□□□□□ -0.19
USP39-205ENST00000442708 ASH2LQ9UBL3 628 aa13.87□□□□□ -0.19
USP39-205ENST00000442708 TIMM10BQ9Y5J6 103 aa13.87□□□□□ -0.19
USP39-205ENST00000442708 ATP23Q9Y6H3 246 aa13.87□□□□□ -0.19
USP39-205ENST00000442708 MYO9AB2RTY4 2548 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 DLGAP1O14490 977 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 RER1O15258 196 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 SNAP29O95721 258 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 HLA-DQA2P01906 255 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 SLC2A5P22732 501 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 PEX2P28328 305 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 PCBD1P61457 104 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 HIST1H3AP68431 136 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 AQP6Q13520 282 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 TRIP10Q15642 601 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 LRRC36Q1X8D7 754 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 HIST2H3PS2Q5TEC6 136 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 PAMR1Q6UXH9 720 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 CFAP77Q6ZQR2 320 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 HIST2H3AQ71DI3 136 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 TCEANCQ8N8B7 351 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 SLC30A7Q8NEW0 376 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 IGFBPL1Q8WX77 278 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 PLEKHA8Q96JA3 519 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 POM121L2Q96KW2 1035 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 GRIP2Q9C0E4 1043 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 OR51V1Q9H2C8 321 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 CISD1Q9NZ45 108 aaKnown RBP13.86□□□□□ -0.19
USP39-205ENST00000442708 ST6GALNAC2Q9UJ37 374 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 POU2F3Q9UKI9 436 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 FBXL3Q9UKT7 428 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 PLEKHA6Q9Y2H5 1048 aa13.86□□□□□ -0.19
USP39-205ENST00000442708 COMMD3-BMI1R4GMX3 469 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms