RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 SF3B4Q15427 424 aaKnown RBP eCLIP17.85■□□□□ 0.45
VRK2-207ENST00000440705 SGCAQ16586 387 aa17.85■□□□□ 0.45
VRK2-207ENST00000440705 CD200R1LQ6Q8B3 271 aa17.85■□□□□ 0.45
VRK2-207ENST00000440705 ARL9Q6T311 187 aa17.85■□□□□ 0.45
VRK2-207ENST00000440705 RPTNQ6XPR3 784 aa17.85■□□□□ 0.45
VRK2-207ENST00000440705 KRT77Q7Z794 578 aa17.85■□□□□ 0.45
VRK2-207ENST00000440705 LINC00346Q8IVM7 164 aa17.85■□□□□ 0.45
VRK2-207ENST00000440705 ST7LQ8TDW4 575 aa17.85■□□□□ 0.45
VRK2-207ENST00000440705 TM9SF2Q99805 663 aa17.85■□□□□ 0.45
VRK2-207ENST00000440705 C1orf198Q9H425 327 aa17.85■□□□□ 0.45
VRK2-207ENST00000440705 ELOVL3Q9HB03 270 aa17.85■□□□□ 0.45
VRK2-207ENST00000440705 CRLF2Q9HC73 371 aa17.85■□□□□ 0.45
VRK2-207ENST00000440705 SLCO1C1Q9NYB5 712 aa17.85■□□□□ 0.45
VRK2-207ENST00000440705 LUZP4Q9P127 313 aa17.85■□□□□ 0.45
VRK2-207ENST00000440705 CLCF1Q9UBD9 225 aa17.85■□□□□ 0.45
VRK2-207ENST00000440705 GRIP1Q9Y3R0 1128 aa17.85■□□□□ 0.45
VRK2-207ENST00000440705 PHF3Q92576 2039 aaKnown RBP17.84■□□□□ 0.45
VRK2-207ENST00000440705 ANKRD11Q6UB99 2663 aaPredicted RBP17.84■□□□□ 0.45
VRK2-207ENST00000440705 TRBV2A0A0J9YWF9 115 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 ZNF254O75437 659 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 KRT33AO76009 404 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 FAM87AP0C7U9 286 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 NPR2P20594 1047 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 EDNRAP25101 427 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 UGT2B10P36537 528 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 MRPS34P82930 218 aaKnown RBP17.84■□□□□ 0.45
VRK2-207ENST00000440705 LINC00303Q3SY05 128 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 DEGS2Q6QHC5 323 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 USP43Q70EL4 1123 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 KBTBD8Q8NFY9 601 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 NDNFQ8TB73 568 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 SMIM19Q96E16 107 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 TMED9Q9BVK6 235 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 EMC7Q9NPA0 242 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 CLEC4AQ9UMR7 237 aa17.84■□□□□ 0.45
VRK2-207ENST00000440705 TRDV1A0A1B0GX56 115 aa17.83■□□□□ 0.45
VRK2-207ENST00000440705 RPP14O95059 124 aaKnown RBP17.83■□□□□ 0.45
VRK2-207ENST00000440705 ZNF182P17025 639 aaPredicted RBP17.83■□□□□ 0.45
VRK2-207ENST00000440705 PSMB10P40306 273 aa17.83■□□□□ 0.45
VRK2-207ENST00000440705 RIDAP52758 137 aaKnown RBP17.83■□□□□ 0.45
VRK2-207ENST00000440705 TUBA1BP68363 451 aa17.83■□□□□ 0.45
VRK2-207ENST00000440705 SLC3A1Q07837 685 aa17.83■□□□□ 0.45
VRK2-207ENST00000440705 LRRN1Q6UXK5 716 aa17.83■□□□□ 0.45
VRK2-207ENST00000440705 TUBA1AQ71U36 451 aa17.83■□□□□ 0.45
VRK2-207ENST00000440705 MS4A15Q8N5U1 240 aa17.83■□□□□ 0.45
VRK2-207ENST00000440705 APH1AQ96BI3 265 aa17.83■□□□□ 0.45
VRK2-207ENST00000440705 GMPPAQ96IJ6 420 aaPredicted RBP17.83■□□□□ 0.45
VRK2-207ENST00000440705 TRIB1Q96RU8 372 aa17.83■□□□□ 0.45
VRK2-207ENST00000440705 TSC22D3Q99576 134 aa17.83■□□□□ 0.45
VRK2-207ENST00000440705 GPR35Q9HC97 309 aa17.83■□□□□ 0.45
VRK2-207ENST00000440705 GSTK1Q9Y2Q3 226 aa17.83■□□□□ 0.45
VRK2-207ENST00000440705 LHFPL6Q9Y693 200 aa17.83■□□□□ 0.45
VRK2-207ENST00000440705 FGF9P31371 208 aaPredicted RBP17.83■□□□□ 0.44
VRK2-207ENST00000440705 SH3BGRP55822 239 aaPredicted RBP17.83■□□□□ 0.44
VRK2-207ENST00000440705 FABP5Q01469 135 aa17.83■□□□□ 0.44
VRK2-207ENST00000440705 STK11Q15831 433 aa17.83■□□□□ 0.44
VRK2-207ENST00000440705 SOWAHCQ53LP3 525 aaPredicted RBP17.83■□□□□ 0.44
VRK2-207ENST00000440705 TSPO2Q5TGU0 170 aa17.83■□□□□ 0.44
VRK2-207ENST00000440705 CORO6Q6QEF8 472 aa17.83■□□□□ 0.44
VRK2-207ENST00000440705 RHOUQ7L0Q8 258 aa17.83■□□□□ 0.44
VRK2-207ENST00000440705 OR5M9Q8NGP3 310 aa17.83■□□□□ 0.44
VRK2-207ENST00000440705 RNF133Q8WVZ7 376 aa17.83■□□□□ 0.44
VRK2-207ENST00000440705 GHSRQ92847 366 aa17.83■□□□□ 0.44
VRK2-207ENST00000440705 NABP1Q96AH0 204 aa17.83■□□□□ 0.44
VRK2-207ENST00000440705 PGLYRP3Q96LB9 341 aa17.83■□□□□ 0.44
VRK2-207ENST00000440705 ALKBH3Q96Q83 286 aaPredicted RBP17.83■□□□□ 0.44
VRK2-207ENST00000440705 TXNL4BQ9NX01 149 aaKnown RBP17.83■□□□□ 0.44
VRK2-207ENST00000440705 GDF2Q9UK05 429 aaPredicted RBP17.83■□□□□ 0.44
VRK2-207ENST00000440705 LAMA5O15230 3695 aa17.82■□□□□ 0.44
VRK2-207ENST00000440705 LRRTM2O43300 516 aa17.82■□□□□ 0.44
VRK2-207ENST00000440705 GPRIN2O60269 458 aa17.82■□□□□ 0.44
VRK2-207ENST00000440705 GDI2P50395 445 aaKnown RBP17.82■□□□□ 0.44
VRK2-207ENST00000440705 FAM27BQ5VT28 67 aa17.82■□□□□ 0.44
VRK2-207ENST00000440705 ZNF100Q8IYN0 542 aa17.82■□□□□ 0.44
VRK2-207ENST00000440705 RPS4Y2Q8TD47 263 aa17.82■□□□□ 0.44
VRK2-207ENST00000440705 WNT2BQ93097 391 aa17.82■□□□□ 0.44
VRK2-207ENST00000440705 ZNF837Q96EG3 531 aaPredicted RBP17.82■□□□□ 0.44
VRK2-207ENST00000440705 ZNF416Q9BWM5 594 aa17.82■□□□□ 0.44
VRK2-207ENST00000440705 DCSTAMPQ9H295 470 aa17.82■□□□□ 0.44
VRK2-207ENST00000440705 SIAEQ9HAT2 523 aa17.82■□□□□ 0.44
VRK2-207ENST00000440705 ASH2LQ9UBL3 628 aa17.82■□□□□ 0.44
VRK2-207ENST00000440705 TMEM8BA6NDV4 472 aa17.81■□□□□ 0.44
VRK2-207ENST00000440705 AGTR1P30556 359 aa17.81■□□□□ 0.44
VRK2-207ENST00000440705 TGFBR1P36897 503 aa17.81■□□□□ 0.44
VRK2-207ENST00000440705 ROR2Q01974 943 aaKnown RBP17.81■□□□□ 0.44
VRK2-207ENST00000440705 ALKBH1Q13686 389 aaKnown RBP17.81■□□□□ 0.44
VRK2-207ENST00000440705 CEACAM16Q2WEN9 425 aa17.81■□□□□ 0.44
VRK2-207ENST00000440705 ZNF324BQ6AW86 544 aaPredicted RBP17.81■□□□□ 0.44
VRK2-207ENST00000440705 ZNF544Q6NX49 715 aa17.81■□□□□ 0.44
VRK2-207ENST00000440705 FDX2Q6P4F2 183 aa17.81■□□□□ 0.44
VRK2-207ENST00000440705 SPATC1Q76KD6 591 aa17.81■□□□□ 0.44
VRK2-207ENST00000440705 LINGO2Q7L985 606 aa17.81■□□□□ 0.44
VRK2-207ENST00000440705 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.81■□□□□ 0.44
VRK2-207ENST00000440705 RNF166Q96A37 237 aaPredicted RBP17.81■□□□□ 0.44
VRK2-207ENST00000440705 SLAMF6Q96DU3 332 aa17.81■□□□□ 0.44
VRK2-207ENST00000440705 TRMT61AQ96FX7 289 aaKnown RBP17.81■□□□□ 0.44
VRK2-207ENST00000440705 MAP6Q96JE9 813 aa17.81■□□□□ 0.44
VRK2-207ENST00000440705 HDHD5Q9BXW7 423 aa17.81■□□□□ 0.44
VRK2-207ENST00000440705 KCNN2Q9H2S1 579 aa17.81■□□□□ 0.44
VRK2-207ENST00000440705 RNF167Q9H6Y7 350 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms