RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 SMIM11AP58511 58 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 RIN1Q13671 783 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 PCGF3Q3KNV8 242 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 ZNF718Q3SXZ3 478 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 ELFN2Q5R3F8 820 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 ZNF774Q6NX45 483 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 ARL9Q6T311 187 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 C16orf89Q6UX73 402 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 IL17RELQ6ZVW7 336 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 FAM86B1Q8N7N1 296 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 RASD2Q96D21 266 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 NSMCE2Q96MF7 247 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 MDFIQ99750 246 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 ZNF416Q9BWM5 594 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 EMC7Q9NPA0 242 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 POLE4Q9NR33 117 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 DECR2Q9NUI1 292 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 NDRG4Q9ULP0 352 aaKnown RBP17■□□□□ 0.31
SHROOM1-204ENST00000440118 POLR1DQ9Y2S0 133 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 MXRA5Q9NR99 2828 aa17■□□□□ 0.31
SHROOM1-204ENST00000440118 IGLV3-9A0A075B6K5 115 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 TRBV4-1A0A0J9YWV2 114 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 PRSS37A4D1T9 235 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 UNC119BA6NIH7 251 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 SOCS2O14508 198 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 CDC14BO60729 498 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 LILRA1O75019 489 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 NCR1O76036 304 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 MAGEB1P43366 347 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 CCL8P80075 99 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 SCRN3Q0VDG4 424 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 FHL1Q13642 323 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 MESTQ5EB52 335 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 FAM120AOSQ5T036 256 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 GPR139Q6DWJ6 353 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 UGT2A3Q6UWM9 527 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 ZNF101Q8IZC7 436 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 LINC01356Q8N9X3 169 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 FANK1Q8TC84 345 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 PYURFQ96I23 114 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 POM121L2Q96KW2 1035 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 WNT5BQ9H1J7 359 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 GORASP2Q9H8Y8 452 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 IL20RAQ9UHF4 553 aa16.99■□□□□ 0.31
SHROOM1-204ENST00000440118 RNF212BA8MTL3 300 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 AHCYL1O43865 530 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 DOK2O60496 412 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 GADD45GO95257 159 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 ABHD16AO95870 558 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 HSD17B1P14061 328 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 SDHAP31040 664 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 IL2RGP31785 369 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 CENPAP49450 140 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 RPS6KA3P51812 740 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 TEKQ02763 1124 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 FOXL2NBQ6ZUU3 175 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 RFPL4BQ6ZWI9 263 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 CXXC5Q7LFL8 322 aaKnown RBP16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 TSEN54Q7Z6J9 526 aaKnown RBP16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 CDRT15Q96T59 188 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 SYT4Q9H2B2 425 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 ELOVL3Q9HB03 270 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 ZNF275Q9NSD4 429 aaPredicted RBP16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 SIGLEC7Q9Y286 467 aa16.98■□□□□ 0.31
SHROOM1-204ENST00000440118 LOC100509620A0A075B734 347 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 ARPC2O15144 300 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 SLC16A7O60669 478 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 FABP3P05413 133 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 CTLA4P16410 223 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 COL8A2P25067 703 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 MSX2P35548 267 aaPredicted RBP16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 WNT5AP41221 380 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 OMPP47874 163 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 HTR5AP47898 357 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 LIMS1P48059 325 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 ZNF81P51508 661 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 PPP1CBP62140 327 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 MRPS11P82912 194 aaKnown RBP16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 ENDOGQ14249 297 aaKnown RBP16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 SEC23BQ15437 767 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 TSTQ16762 297 aaKnown RBP16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 FAM122BQ7Z309 247 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 SYT9Q86SS6 491 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 ADCK1Q86TW2 530 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 C1orf174Q8IYL3 243 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 DEFB107AQ8IZN7 70 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 SLC25A40Q8TBP6 338 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 IPCEF1Q8WWN9 437 aaPredicted RBP16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 C7orf34Q96L11 122 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 SOX7Q9BT81 388 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 WACQ9BTA9 647 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 OR2J1Q9GZK6 312 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 SAP30LQ9HAJ7 183 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 ARL8BQ9NVJ2 186 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 TMCC3Q9ULS5 477 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 IER3IP1Q9Y5U9 82 aa16.97■□□□□ 0.31
SHROOM1-204ENST00000440118 SGCEO43556 437 aa16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 OR10H3O60404 316 aa16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 KHDRBS3O75525 346 aaKnown RBP16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 ZNF26P17031 533 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms