RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 MESTQ5EB52 335 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 KDM8Q8N371 416 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 MRPL48Q96GC5 212 aaKnown RBP12.74□□□□□ -0.37
LIMD1-202ENST00000440097 FOXN4Q96NZ1 517 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 DMRTA2Q96SC8 542 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 ZNF416Q9BWM5 594 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 ZNF69Q9UC07 566 aa12.74□□□□□ -0.37
LIMD1-202ENST00000440097 A0A1B0GUH1 482 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 TMEM200CA6NKL6 621 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 ANXA2P2A6NMY6 339 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 H3BML4 177 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 NTN3O00634 580 aaPredicted RBP12.73□□□□□ -0.37
LIMD1-202ENST00000440097 B3GALNT1O75752 331 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 SC5DO75845 299 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 RPP14O95059 124 aaKnown RBP12.73□□□□□ -0.37
LIMD1-202ENST00000440097 BGLAPP02818 100 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 ADRB1P08588 477 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 EPXP11678 715 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 TRAM1Q15629 374 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 ETFDHQ16134 617 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 MRPL14Q6P1L8 145 aaKnown RBP12.73□□□□□ -0.37
LIMD1-202ENST00000440097 C17orf107Q6ZR85 190 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 LINGO2Q7L985 606 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 PM20D2Q8IYS1 436 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 LRRC75AQ8NAA5 344 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 OR6N2Q8NGY6 317 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 SLC22A8Q8TCC7 542 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 PGLYRP3Q96LB9 341 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 NPAS1Q99742 590 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 ZNF275Q9NSD4 429 aaPredicted RBP12.73□□□□□ -0.37
LIMD1-202ENST00000440097 NCDNQ9UBB6 729 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 OR6C65A6NJZ3 312 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 SHISA8B8ZZ34 492 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 WDPCPO95876 746 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 GIPP09681 153 aaPredicted RBP12.73□□□□□ -0.37
LIMD1-202ENST00000440097 APEHP13798 732 aaKnown RBP12.73□□□□□ -0.37
LIMD1-202ENST00000440097 RPS27P42677 84 aaKnown RBP12.73□□□□□ -0.37
LIMD1-202ENST00000440097 GDI2P50395 445 aaKnown RBP12.73□□□□□ -0.37
LIMD1-202ENST00000440097 PSMA6P60900 246 aaKnown RBP12.73□□□□□ -0.37
LIMD1-202ENST00000440097 SIRPAP78324 504 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 GGTLC2Q14390 218 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 CLVS2Q5SYC1 327 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 OTPQ5XKR4 325 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 NHLRC1Q6VVB1 395 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 ZNF417Q8TAU3 575 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 SCARB1Q8WTV0 552 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 ADAD1Q96M93 576 aaKnown RBP12.73□□□□□ -0.37
LIMD1-202ENST00000440097 ZNF587Q96SQ5 575 aaPredicted RBP12.73□□□□□ -0.37
LIMD1-202ENST00000440097 NMNAT2Q9BZQ4 307 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 SLC26A1Q9H2B4 701 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 PCDHB16Q9NRJ7 776 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 TAS2R5Q9NYW4 299 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 ABRACLQ9P1F3 81 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 GPR160Q9UJ42 338 aa12.73□□□□□ -0.37
LIMD1-202ENST00000440097 NXT1Q9UKK6 140 aaKnown RBP12.73□□□□□ -0.37
LIMD1-202ENST00000440097 PLATP00750 562 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 MT-ATP6P00846 226 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 CD53P19397 219 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 ZNF41P51814 821 aaPredicted RBP12.72□□□□□ -0.37
LIMD1-202ENST00000440097 TRA2AQ13595 282 aaKnown RBP eCLIP12.72□□□□□ -0.37
LIMD1-202ENST00000440097 TMEM205Q6UW68 189 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 OR6V1Q8N148 313 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 MEIOBQ8N635 442 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 LGALS14Q8TCE9 139 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 CMKLR1Q99788 373 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 PDCD1LG2Q9BQ51 273 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 PTDSS2Q9BVG9 487 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 AKAP7Q9P0M2 348 aaPredicted RBP12.72□□□□□ -0.37
LIMD1-202ENST00000440097 IKZF2Q9UKS7 526 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 PRRC2CQ9Y520 2896 aaKnown RBP12.72□□□□□ -0.37
LIMD1-202ENST00000440097 DCHS1Q96JQ0 3298 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 AIPO00170 330 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 SIGLEC5O15389 551 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 RP2O75695 350 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 GPANK1O95872 356 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 APOC3P02656 99 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 CELA2AP08217 269 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 S100A11P31949 105 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 ZNF169Q14929 603 aaPredicted RBP12.72□□□□□ -0.37
LIMD1-202ENST00000440097 OR7A5Q15622 319 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 ACKR1Q16570 336 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 SGCBQ16585 318 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 EMC4Q5J8M3 183 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 GLDNQ6ZMI3 551 aaPredicted RBP12.72□□□□□ -0.37
LIMD1-202ENST00000440097 SPICQ8N5J4 248 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 ZNF248Q8NDW4 579 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 ZNF671Q8TAW3 534 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 LAMP5Q9UJQ1 280 aa12.72□□□□□ -0.37
LIMD1-202ENST00000440097 ANKUB1A6NFN9 424 aa12.71□□□□□ -0.37
LIMD1-202ENST00000440097 CTDSPLO15194 276 aa12.71□□□□□ -0.37
LIMD1-202ENST00000440097 ARPC5O15511 151 aa12.71□□□□□ -0.37
LIMD1-202ENST00000440097 OR2T1O43869 369 aa12.71□□□□□ -0.37
LIMD1-202ENST00000440097 OPN1LWP04000 364 aa12.71□□□□□ -0.37
LIMD1-202ENST00000440097 ANXA7P20073 488 aaKnown RBP12.71□□□□□ -0.37
LIMD1-202ENST00000440097 CAPZA2P47755 286 aa12.71□□□□□ -0.37
LIMD1-202ENST00000440097 RAP2BP61225 183 aa12.71□□□□□ -0.37
LIMD1-202ENST00000440097 ZFP36L1Q07352 338 aaKnown RBP12.71□□□□□ -0.37
LIMD1-202ENST00000440097 IL10RAQ13651 578 aa12.71□□□□□ -0.37
LIMD1-202ENST00000440097 MELKQ14680 651 aa12.71□□□□□ -0.37
LIMD1-202ENST00000440097 LINC01590Q5TEZ4 76 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms