RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 NPIPB9F8W1W9 429 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 TBX19O60806 448 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 HEXAP06865 529 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 DBIP07108 87 aaKnown RBP14.37□□□□□ -0.11
DHFR-201ENST00000439211 OR4E1P0C645 316 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 NHLH2Q02577 135 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 NFATC4Q14934 902 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 NPRL2Q8WTW4 380 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 RGP1Q92546 391 aaPredicted RBP14.37□□□□□ -0.11
DHFR-201ENST00000439211 ELF4Q99607 663 aaPredicted RBP14.37□□□□□ -0.11
DHFR-201ENST00000439211 HCAR1Q9BXC0 346 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 NOX4Q9NPH5 578 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 RCC2Q9P258 522 aaKnown RBP14.37□□□□□ -0.11
DHFR-201ENST00000439211 ANKRD20A5PA0PJZ0 165 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 HLA-DQA2P01906 255 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 THBS1P07996 1170 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 TYRP1P17643 537 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 SLC6A6P31641 620 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 GJA4P35212 333 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 TAS2R20P59543 309 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 S100A10P60903 97 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 COL13A1Q5TAT6 717 aaPredicted RBP14.37□□□□□ -0.11
DHFR-201ENST00000439211 HIST2H3PS2Q5TEC6 136 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 LIPNQ5VXI9 398 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 BPIFB2Q8N4F0 458 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 EID2Q8N6I1 236 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 LRFN5Q96NI6 719 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 SDF2Q99470 211 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 MED17Q9NVC6 651 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 GSKIPQ9P0R6 139 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 V9GY05 133 aa14.37□□□□□ -0.11
DHFR-201ENST00000439211 PMS2P2O95744 297 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 HIST1H1BP16401 226 aaKnown RBP14.36□□□□□ -0.11
DHFR-201ENST00000439211 C5AR1P21730 350 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 STARD6P59095 220 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 DEFB110Q30KQ9 67 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 ZNF542PQ5EBM4 170 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 TMEM31Q5JXX7 168 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 NIPAL3Q6P499 406 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 BMPERQ8N8U9 685 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 SLC22A18Q96BI1 424 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 FGF22Q9HCT0 170 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 FBXO34Q9NWN3 711 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 HEBP2Q9Y5Z4 205 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 C4orf51C9J302 202 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 NUDT14O95848 222 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 GIMD1P0DJR0 217 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 MAKP20794 623 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 NRG3P56975 720 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 C4orf17Q53FE4 359 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 ZNF776Q68DI1 518 aaPredicted RBP14.36□□□□□ -0.11
DHFR-201ENST00000439211 TANGO2Q6ICL3 276 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 ZNF619Q8N2I2 560 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 JAGN1Q8N5M9 183 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 SLC39A7Q92504 469 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 FAM83CQ9BQN1 747 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 GPR61Q9BZJ8 451 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 IER3IP1Q9Y5U9 82 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 CENPVL1A0A0U1RR11 272 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 SNRPCP09234 159 aaKnown RBP14.36□□□□□ -0.11
DHFR-201ENST00000439211 MYOGP15173 224 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 AKR1C4P17516 323 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 PRSS3P35030 304 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 RPS15AP62244 130 aaKnown RBP14.36□□□□□ -0.11
DHFR-201ENST00000439211 RAP1AP62834 184 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 MPPED2Q15777 294 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 MARS2Q96GW9 593 aaKnown RBP14.36□□□□□ -0.11
DHFR-201ENST00000439211 APOOQ9BUR5 198 aa14.36□□□□□ -0.11
DHFR-201ENST00000439211 MAS1P04201 325 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 CDX1P47902 265 aaPredicted RBP14.35□□□□□ -0.11
DHFR-201ENST00000439211 FOXO1Q12778 655 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 MLC1Q15049 377 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 INPP5JQ15735 1006 aaPredicted RBP14.35□□□□□ -0.11
DHFR-201ENST00000439211 C7orf61Q8IZ16 206 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 CARFQ8N187 725 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 PHOSPHO2Q8TCD6 241 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 ASB16Q96NS5 453 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 IP6K3Q96PC2 410 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 GPR174Q9BXC1 333 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 MKKSQ9NPJ1 570 aaPredicted RBP14.35□□□□□ -0.11
DHFR-201ENST00000439211 ZDHHC8Q9ULC8 765 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 SLC35A3Q9Y2D2 325 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 M0QYG6 137 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 RAB40ALP0C0E4 278 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 CPMP14384 443 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 GALP22466 123 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 FXYD6P3P58550 94 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 FIGLAQ6QHK4 219 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 TMEM205Q6UW68 189 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 FAM220AQ7Z4H9 259 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 DMBX1Q8NFW5 382 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 CCL4L1Q8NHW4 92 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 RAB40AQ8WXH6 277 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 COX14Q96I36 57 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 HDAC8Q9BY41 377 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 SMOC1Q9H4F8 434 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 TBC1D29Q9UFV1 150 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 HSPA12AO43301 675 aa14.35□□□□□ -0.11
DHFR-201ENST00000439211 CRTAPO75718 401 aaPredicted RBP14.35□□□□□ -0.11
DHFR-201ENST00000439211 RCC1P18754 421 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms