RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 CEACAM16Q2WEN9 425 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 LIN52Q52LA3 116 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 RNF220Q5VTB9 566 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 RUSC1-AS1Q66K80 236 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 DHRS4L2Q6PKH6 230 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 CBLL1Q75N03 491 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 ARMC8Q8IUR7 673 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 PARP8Q8N3A8 854 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 TMEM86BQ8N661 226 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 OR52P1PQ8NH57 321 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 CCL17Q92583 94 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 UTP4Q969X6 686 aaKnown RBP9.41□□□□□ -0.9
CSTF3-203ENST00000438862 KTI12Q96EK9 354 aaPredicted RBP9.41□□□□□ -0.9
CSTF3-203ENST00000438862 CLPTM1LQ96KA5 538 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 KRTAP9-9Q9BYP9 154 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 KRTAP9-4Q9BYQ2 154 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 RASSF4Q9H2L5 321 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 SAP30LQ9HAJ7 183 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 DCAF13Q9NV06 445 aaKnown RBP9.41□□□□□ -0.9
CSTF3-203ENST00000438862 ADPRHL2Q9NX46 363 aa9.41□□□□□ -0.9
CSTF3-203ENST00000438862 IGLV3-9A0A075B6K5 115 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 ISPDA4D126 451 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 ERICH4A6NGS2 130 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 FAAHO00519 579 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 ARPC2O15144 300 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 BCAS1O75363 584 aaPredicted RBP9.4□□□□□ -0.9
CSTF3-203ENST00000438862 PLATP00750 562 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 HLA-HP01893 362 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 CSF1P09603 554 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 UQCRBP14927 111 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 ZNF250P15622 560 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 CXCR1P25024 350 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 KLF3P57682 345 aaPredicted RBP9.4□□□□□ -0.9
CSTF3-203ENST00000438862 PAX8Q06710 450 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 PIGFQ07326 219 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 FLOT2Q14254 428 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 ZNF771Q7L3S4 317 aaPredicted RBP9.4□□□□□ -0.9
CSTF3-203ENST00000438862 ZNF440Q8IYI8 595 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 FAM156AQ8NDB6 213 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 CPEB3Q8NE35 698 aaKnown RBP9.4□□□□□ -0.9
CSTF3-203ENST00000438862 LINC01006Q8NI28 216 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 SYNPRQ8TBG9 265 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 SLC26A7Q8TE54 656 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 FAM162AQ96A26 154 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 LRGUKQ96M69 825 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 PCDHAC1Q9H158 963 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 NOX4Q9NPH5 578 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 EGFL7Q9UHF1 273 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 CACNG2Q9Y698 323 aa9.4□□□□□ -0.9
CSTF3-203ENST00000438862 PLXNB1O43157 2135 aa9.4□□□□□ -0.91
CSTF3-203ENST00000438862 CDHR4A6H8M9 788 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 RAB36O95755 333 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 CLPTM1O96005 669 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 IGHV4-38-2P0DP08 117 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 ZNF43P17038 809 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 SLC6A9P48067 706 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 PTDSS1P48651 473 aaKnown RBP9.39□□□□□ -0.91
CSTF3-203ENST00000438862 CRYBA2P53672 197 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 CLDN17P56750 224 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 PROK1P58294 105 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 BPIFB3P59826 476 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 ACTR3P61158 418 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 RAB1AP62820 205 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 CYBRD1Q53TN4 286 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 C1orf146Q5VVC0 180 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 ZNF620Q6ZNG0 422 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 JAZF1Q86VZ6 243 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 PIK3C3Q8NEB9 887 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 C11orf40Q8WZ69 217 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 TAMM41Q96BW9 452 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 CCDC124Q96CT7 223 aaKnown RBP9.39□□□□□ -0.91
CSTF3-203ENST00000438862 ZG16BQ96DA0 208 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 DUS3LQ96G46 650 aaKnown RBP9.39□□□□□ -0.91
CSTF3-203ENST00000438862 PYURFQ96I23 114 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 DIRC2Q96SL1 478 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 MAGIXQ9H6Y5 334 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 IL20RAQ9UHF4 553 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 POMT1Q9Y6A1 747 aa9.39□□□□□ -0.91
CSTF3-203ENST00000438862 TCRBV3S1A0A5B6 114 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 A8MVM7 634 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 A8MXK9 166 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 AP3D1O14617 1153 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 FMO6PO60774 539 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 SERPINA1P01009 418 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 OPN1MWP04001 364 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 OPN1MW2P0DN77 364 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 OPN1MW3P0DN78 364 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 NCK1P16333 377 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 AQP1P29972 269 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 CD80P33681 288 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 MSX2P35548 267 aaPredicted RBP9.38□□□□□ -0.91
CSTF3-203ENST00000438862 CAMK2DQ13557 499 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 TSTQ16762 297 aaKnown RBP9.38□□□□□ -0.91
CSTF3-203ENST00000438862 DUSP7Q16829 419 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 DEFB112Q30KQ8 113 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 RPS26P11Q5JNZ5 115 aaPredicted RBP9.38□□□□□ -0.91
CSTF3-203ENST00000438862 Q6YL49 198 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 ZNF627Q7L945 461 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 OLIG3Q7RTU3 272 aa9.38□□□□□ -0.91
CSTF3-203ENST00000438862 KLHL36Q8N4N3 616 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms