RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ANP32BQ92688 251 aaKnown RBP1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 HIST1H2ACQ93077 130 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 EPSTI1Q96J88 318 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 NSMCE2Q96MF7 247 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 WFIKKN1Q96NZ8 548 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 OR4F4Q96R69 305 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 PLIN2Q99541 437 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 BPIFA3Q9BQP9 254 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 CCDC77Q9BR77 488 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 ERP44Q9BS26 406 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 TPPP3Q9BW30 176 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 NFKBIZQ9BYH8 718 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 OSBPL8Q9BZF1 889 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 NACA2Q9H009 215 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 DDX47Q9H0S4 455 aaKnown RBP1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 CLSTN2Q9H4D0 955 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 COQ10BQ9H8M1 238 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 LRRC40Q9H9A6 602 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 Q9HAA7 133 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 LPAR2Q9HBW0 351 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 ADGRL4Q9HBW9 690 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 CRLF2Q9HC73 371 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 NGBQ9NPG2 151 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF331Q9NQX6 463 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 PIGVQ9NUD9 493 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 DDX19AQ9NUU7 478 aaKnown RBP1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 ERVK-18Q9QC07 812 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF532Q9HCE3 1301 aa1.63□□□□□ -2.15
HMGB1P18-201ENST00000438801 A0A087WZY1 265 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 A0A0A6YYC8 382 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 SMIM30A4D0T7 59 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 NUPR2A6NF83 97 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 ERICH4A6NGS2 130 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 LRRIQ4A6NIV6 560 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 YJEFN3A6XGL0 299 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 A8MUA0 341 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 H0Y8G0 127 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 H3BQV1 296 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 I3L1I5 382 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 K7ERI5 159 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 POLR3GO15318 223 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 CFLARO15519 480 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 TBX19O60806 448 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 DEXIO95424 95 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 DIRAS3O95661 229 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 CALM1P0DP23 149 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 CALM2P0DP24 149 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 CALM3P0DP25 149 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 NCF1P14598 390 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 GCFC2P16383 781 aaKnown RBP1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZP3P21754 424 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 GALP22466 123 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 LOXP28300 417 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 ETV1P50549 477 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 SLC7A2P52569 658 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 UCP2P55851 309 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 NME5P56597 212 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 VSX2P58304 361 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 PFN3P60673 137 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZP4Q12836 540 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 CDH17Q12864 832 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 HERPUD1Q15011 391 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 P2RY14Q15391 338 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 DPYSL2Q16555 572 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 CCDC14Q49A88 953 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 TMEM41BQ5BJD5 291 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 C9orf64Q5T6V5 341 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 APOOLQ6UXV4 268 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 DLEU7Q6UYE1 221 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 TAS2R42Q7RTR8 314 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF573Q86YE8 665 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 STHQ8IWL8 128 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF679Q8IYX0 411 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 STK40Q8N2I9 435 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 RNF148Q8N7C7 305 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 OR56B1Q8NGI3 324 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 OR10T2Q8NGX3 314 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 RNASE8Q8TDE3 154 aaKnown RBP1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 ST7LQ8TDW4 575 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 ESR2Q92731 530 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 IL22RA2Q969J5 263 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 RAB39BQ96DA2 213 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 C11orf24Q96F05 449 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 DTD2Q96FN9 168 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 TPD52L3Q96J77 140 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 C8orf76Q96K31 380 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 SLC17A9Q9BYT1 436 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 RAB33BQ9H082 229 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 STMN4Q9H169 189 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 CARD9Q9H257 536 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 SLC26A1Q9H2B4 701 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 EXO5Q9H790 373 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 DCLRE1BQ9H816 532 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 RMND5AQ9H871 391 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 DDX18Q9NVP1 670 aaKnown RBP1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNHIT6Q9NWK9 470 aaKnown RBP1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 SMPD3Q9NY59 655 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 TUBGCP4Q9UGJ1 667 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 PSME2Q9UL46 239 aa1.62□□□□□ -2.15
HMGB1P18-201ENST00000438801 DNPEPQ9ULA0 475 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms