RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 C17orf82Q86X59 251 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 GKN2Q86XP6 184 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 TMEM123Q8N131 208 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 CLEC4FQ8N1N0 589 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 TEX9Q8N6V9 391 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 ZNF740Q8NDX6 193 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 OR10A7Q8NGE5 316 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 OR52I1Q8NGK6 324 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 OR9A1PQ8NGU1 263 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 OR56B4Q8NH76 319 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 DDI1Q8WTU0 396 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 FBXO32Q969P5 355 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 PELI1Q96FA3 418 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 SMIM14Q96QK8 99 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 ZNF607Q96SK3 696 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 KLHDC3Q9BQ90 382 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 SRXN1Q9BYN0 137 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 ULBP3Q9BZM4 244 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 NAT10Q9H0A0 1025 aaKnown RBP2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 ZNF385DQ9H6B1 395 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 NARFLQ9H6Q4 476 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 RMND5AQ9H871 391 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 IL36GQ9NZH8 169 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 RNF14Q9UBS8 474 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 MRPS33Q9Y291 106 aaKnown RBP2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 MEMO1Q9Y316 297 aa2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 ZNF638Q14966 1978 aaKnown RBP2.25□□□□□ -2.05
HMGB3P12-201ENST00000438745 KMT2CQ8NEZ4 4911 aaKnown RBP2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 ZGRF1Q86YA3 2104 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 TNRC6AQ8NDV7 1962 aaKnown RBP2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 IGHV5-10-1A0A0J9YXX1 117 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 A0A0U1RQS6 177 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 SPTY2D1-AS1A0A0U1RR47 76 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 LRP5LA4QPB2 252 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 SMCO2A6NFE2 343 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 E7ESA3 106 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 H0YCG3 227 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 ABCD4O14678 606 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 COCHO43405 550 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 OR10H3O60404 316 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 HMMRO75330 724 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 CTAG2O75638 210 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 SUPT7LO94864 414 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 LALBAP00709 142 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 KRT8P05787 483 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 H2BFMP0C1H6 154 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 GCFC2P16383 781 aaKnown RBP2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 ELK1P19419 428 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 GABRR1P24046 479 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 CD1BP29016 333 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 ARL2P36404 184 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 P2RY1P47900 373 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 RPS15P62841 145 aaKnown RBP2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 GNB2P62879 340 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 ACTG1P63261 375 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 CHRNB3Q05901 458 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 TRDNQ13061 729 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 SLC25A52Q3SY17 297 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 XKR4Q5GH76 650 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 TTC23Q5W5X9 447 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 ALKAL1Q6UXT8 129 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 Q6ZS92 163 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 ACOT7LQ6ZUV0 252 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 CCDC80Q76M96 950 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 VRK2Q86Y07 508 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 DHRSXQ8N5I4 330 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 ANKFN1Q8N957 763 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 OR2AP1Q8NGE2 309 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 OR4D9Q8NGE8 314 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 OR1F12Q8NHA8 337 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 TCTEX1D2Q8WW35 142 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 FRAT1Q92837 279 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 IMMP1LQ96LU5 166 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 LINC00167Q96N53 147 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 TBX15Q96SF7 602 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 EBF4Q9BQW3 602 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 LXNQ9BS40 222 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 BEX2Q9BXY8 128 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 POLR2J2Q9GZM3 115 aaKnown RBP2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 MAGT1Q9H0U3 335 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 POLR2J3Q9H1A7 115 aaKnown RBP2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 TCEAL2Q9H3H9 227 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 XPNPEP1Q9NQW7 623 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 TREM2Q9NZC2 230 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 ADAM22Q9P0K1 906 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 SEC14L3Q9UDX4 400 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 PHF11Q9UIL8 331 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 AK6Q9Y3D8 172 aaKnown RBP2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 UGT2A1Q9Y4X1 527 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 COL27A1Q8IZC6 1860 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 MGAM2Q2M2H8 2515 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 DOCK9Q9BZ29 2069 aa2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 CHD3Q12873 2000 aaKnown RBP2.24□□□□□ -2.05
HMGB3P12-201ENST00000438745 SCN8AQ9UQD0 1980 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 ANK2Q01484 3957 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 NUMA1Q14980 2115 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 MYO18AQ92614 2054 aaKnown RBP2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 A0A0G2JRQ6 117 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 NKX2-6A6NCS4 301 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 C21orf140B9A014 251 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms