RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SCRN3Q0VDG4 424 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 ENDOGQ14249 297 aaKnown RBP21.27■■□□□ 1
RAPGEF1-206ENST00000438647 MSMPQ1L6U9 139 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 OR2T5Q6IEZ7 315 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 PTCHD4Q6ZW05 846 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 JAZF1Q86VZ6 243 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 MAPK1IP1LQ8NDC0 245 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 OR52L1Q8NGH7 329 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 OR4C15Q8NGM1 316 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 OR2T29Q8NH02 315 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 C11orf40Q8WZ69 217 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 POM121L2Q96KW2 1035 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 SAMD8Q96LT4 415 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 SNX18Q96RF0 628 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 DUSP13Q9UII6 198 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 GPR160Q9UJ42 338 aa21.27■■□□□ 1
RAPGEF1-206ENST00000438647 SAMHD1Q9Y3Z3 626 aaKnown RBP21.27■■□□□ 1
RAPGEF1-206ENST00000438647 NF1P21359 2839 aa21.27■□□□□ 0.99
RAPGEF1-206ENST00000438647 NIPBLQ6KC79 2804 aaeCLIP21.27■□□□□ 0.99
RAPGEF1-206ENST00000438647 TLN2Q9Y4G6 2542 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 C5orf49A4QMS7 147 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 AQP12BA6NM10 295 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 ACOT8O14734 319 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 IDH3BO43837 385 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 TP53P04637 393 aaPredicted RBP21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 CDKN2AP42771 156 aaKnown RBP21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 GK3PQ14409 553 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 AQP12AQ8IXF9 295 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 C1orf174Q8IYL3 243 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 OR9Q2Q8NGE9 314 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 BTBD10Q9BSF8 475 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 PIMREGQ9BSJ6 248 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 NUAK2Q9H093 628 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 WNT5BQ9H1J7 359 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 OR51B6Q9H340 312 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 EMC7Q9NPA0 242 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 REV1Q9UBZ9 1251 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 NDRG4Q9ULP0 352 aaKnown RBP21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 FZR1Q9UM11 496 aa21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 COA3Q9Y2R0 106 aaPredicted RBP21.26■□□□□ 0.99
RAPGEF1-206ENST00000438647 A0A1W2PPW3 197 aa21.25■□□□□ 0.99
RAPGEF1-206ENST00000438647 LOC390937A0A1W2PQ73 354 aa21.25■□□□□ 0.99
RAPGEF1-206ENST00000438647 RENP00797 406 aa21.25■□□□□ 0.99
RAPGEF1-206ENST00000438647 KLF3P57682 345 aaPredicted RBP21.25■□□□□ 0.99
RAPGEF1-206ENST00000438647 LSM6P62312 80 aaKnown RBP21.25■□□□□ 0.99
RAPGEF1-206ENST00000438647 AQP6Q13520 282 aa21.25■□□□□ 0.99
RAPGEF1-206ENST00000438647 LEG1Q6P5S2 330 aa21.25■□□□□ 0.99
RAPGEF1-206ENST00000438647 PGM2L1Q6PCE3 622 aa21.25■□□□□ 0.99
RAPGEF1-206ENST00000438647 SYNPRQ8TBG9 265 aa21.25■□□□□ 0.99
RAPGEF1-206ENST00000438647 CDH10Q9Y6N8 788 aa21.25■□□□□ 0.99
RAPGEF1-206ENST00000438647 HIVEP2P31629 2446 aa21.25■□□□□ 0.99
RAPGEF1-206ENST00000438647 SCG5P05408 212 aa21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 COX5BP10606 129 aa21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 ZNF250P15622 560 aa21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 LOXL1Q08397 574 aaPredicted RBP21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 CARTPTQ16568 116 aa21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 MICAQ29983 383 aa21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 ZNF774Q6NX45 483 aa21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 ARL9Q6T311 187 aa21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 UGT2A3Q6UWM9 527 aa21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 LRP11Q86VZ4 500 aa21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 ZCCHC24Q8N2G6 241 aaKnown RBP21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 AQP11Q8NBQ7 271 aa21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 ICA1LQ8NDH6 482 aa21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 ZNF540Q8NDQ6 660 aa21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 OR1J1Q8NGS3 322 aa21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 SLCO1C1Q9NYB5 712 aa21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 U3KQV3 271 aa21.24■□□□□ 0.99
RAPGEF1-206ENST00000438647 NSD1Q96L73 2696 aaPredicted RBP21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 RTTNQ86VV8 2226 aa21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 LOC100509620A0A075B734 347 aa21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 DHRS12A0PJE2 317 aa21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 DNAJC8O75937 253 aaPredicted RBP21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 HIST1H1CP16403 213 aaKnown RBP21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 FLOT2Q14254 428 aa21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 MOGQ16653 247 aa21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 NKPD1Q17RQ9 610 aa21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 ZNF770Q6IQ21 691 aaPredicted RBP21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 RASSF6Q6ZTQ3 369 aa21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 OR4K13Q8NH42 304 aa21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 SLC7A6OSQ96CW6 309 aaPredicted RBP21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 FOXN4Q96NZ1 517 aa21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 NMNAT3Q96T66 252 aa21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 CHID1Q9BWS9 393 aa21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 TPK1Q9H3S4 243 aa21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 ELOVL3Q9HB03 270 aa21.23■□□□□ 0.99
RAPGEF1-206ENST00000438647 IGLV3-9A0A075B6K5 115 aa21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 A0A096LNT2 108 aa21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 SGCEO43556 437 aa21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 DOK2O60496 412 aa21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 GASTP01350 101 aa21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 DAOP14920 347 aa21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 GSTM3P21266 225 aa21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 ALDH3B1P43353 468 aa21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 PPP2R2BQ00005 443 aa21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 ADGRG5Q8IZF4 528 aa21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 SNX33Q8WV41 574 aa21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 RACGAP1Q9H0H5 632 aa21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 EGLN3Q9H6Z9 239 aa21.22■□□□□ 0.99
RAPGEF1-206ENST00000438647 IL20Q9NYY1 176 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms