RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 TCP10Q12799 353 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 IL18Q14116 193 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 PON3Q15166 354 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 PTPN20Q4JDL3 420 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 SPECC1LQ69YQ0 1117 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 TMEM53Q6P2H8 277 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 TMEM220Q6QAJ8 160 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 CLEC2AQ6UVW9 174 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 CERS6Q6ZMG9 384 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 NCCRP1Q6ZVX7 275 aaPredicted RBP2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 BIVMQ86UB2 503 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 GABRG1Q8N1C3 465 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 ZFP41Q8N8Y5 198 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 BPIFCQ8NFQ6 507 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 DUS3LQ96G46 650 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 MTG1Q9BT17 334 aaPredicted RBP2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 MRPL37Q9BZE1 423 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 PLA2G2FQ9BZM2 168 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 BEX1Q9HBH7 125 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 CCNB1IP1Q9NPC3 277 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 C20orf96Q9NUD7 363 aaPredicted RBP2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 LYARQ9NX58 379 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 LGALS13Q9UHV8 139 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 ST3GAL6Q9Y274 331 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 ASTN1O14525 1302 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 WDR19Q8NEZ3 1342 aa2.32□□□□□ -2.04
TRAPPC13-204ENST00000438419 YEATS2Q9ULM3 1422 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 MADDQ8WXG6 1647 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 NUP214P35658 2090 aaPredicted RBP2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 PLAC8L1A1L4L8 177 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 NDUFAB1O14561 156 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 NUPL2O15504 423 aaKnown RBP2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 SRP72O76094 671 aaKnown RBP2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 ASGR1P07306 291 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 GNAO1P09471 354 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 OR8G3PP0DMU2 310 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 UBE2AP49459 152 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 ZNF136P52737 540 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 CRISP1P54107 249 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 C1QTNF8P60827 252 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 STXBP1P61764 594 aaKnown RBP2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 MXD1Q05195 221 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 LRRC63Q05C16 580 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 ILKQ13418 452 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 SF3A2Q15428 464 aaKnown RBP2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 ANKRD22Q5VYY1 191 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 TTC23LQ6PF05 361 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 MBOAT1Q6ZNC8 495 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 CMC1Q7Z7K0 106 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 SCD5Q86SK9 330 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 DUSP18Q8NEJ0 188 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 LYPD6BQ8NI32 183 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 CD300LFQ8TDQ1 290 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 TSEN15Q8WW01 171 aaKnown RBP2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 EEF1AKMT3Q96AZ1 226 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 CEP170P1Q96L14 293 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 TEKT3Q9BXF9 490 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 NCOR1P1Q9H4R4 102 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 RETNQ9HD89 108 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 DDX18Q9NVP1 670 aaKnown RBP2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 CD84Q9UIB8 345 aa2.31□□□□□ -2.04
TRAPPC13-204ENST00000438419 CFAP43Q8NDM7 1665 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 STRCQ7RTU9 1775 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 IGLV11-55A0A075B6I3 123 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 TRBV9A0A0B4J1U6 114 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 A0A1B0GW55 424 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 NCF1BA6NI72 391 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 NCF1CA8MVU1 366 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 MAGEB4O15481 346 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 EIF4E2O60573 245 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 ICOSLGO75144 302 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 FKBP6O75344 327 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 CCNB2O95067 398 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 DUX4L2P0CJ85 424 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 DUX4L3P0CJ86 424 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 DUX4L5P0CJ88 424 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 DUX4L6P0CJ89 424 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 DUX4L7P0CJ90 424 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 PRPS2P11908 318 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 ADRB3P13945 408 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 GSTM3P21266 225 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 CDKN2BP42772 138 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 NAMPTP43490 491 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 MRPL19P49406 292 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 CSNK1EP49674 416 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 PPOXP50336 477 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 RAB9AP51151 201 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 RND2P52198 227 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 HERVK_113P61574 105 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 MAB21L1Q13394 359 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 GGTLC2Q14390 218 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 PSMD5Q16401 504 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 HES5Q5TA89 166 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 DUX4L9Q6RFH8 374 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 LYPD2Q6UXB3 125 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 TEX43Q6ZNM6 134 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 ABHD13Q7L211 337 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 SSX9Q7RTT3 188 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 HDDC2Q7Z4H3 204 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 ZNF786Q8N393 782 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms