RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 OR4F15Q8NGB8 312 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 OR10P1Q8NGE3 313 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 ACTR3CQ9C0K3 210 aaPredicted RBP10.27□□□□□ -0.77
SCN4A-201ENST00000435607 PEAK1Q9H792 1746 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 MAGEB4O15481 346 aaPredicted RBP10.27□□□□□ -0.77
SCN4A-201ENST00000435607 UBL3O95164 117 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 ANKRD34CP0C6C1 535 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 ADRA2CP18825 462 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 SLC19A1P41440 591 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 CCR5P51681 352 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 RHOBP62745 196 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 ZNF705AQ6ZN79 300 aaPredicted RBP10.27□□□□□ -0.77
SCN4A-201ENST00000435607 ZNF835Q9Y2P0 537 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 A0A0B4J2A0 478 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 CACNG3O60359 315 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 G0S2P27469 103 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 HTR6P50406 440 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 ETFRF1Q6IPR1 90 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 ST8SIA4Q92187 359 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 SLC25A21Q9BQT8 299 aaPredicted RBP10.27□□□□□ -0.77
SCN4A-201ENST00000435607 ZNF696Q9H7X3 374 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 SHPKQ9UHJ6 478 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 MYH14Q7Z406 1995 aaKnown RBP10.27□□□□□ -0.77
SCN4A-201ENST00000435607 TRNP1Q6NT89 227 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 RETREG3Q86VR2 466 aa10.27□□□□□ -0.77
SCN4A-201ENST00000435607 TAGLN2P37802 199 aaKnown RBP10.26□□□□□ -0.77
SCN4A-201ENST00000435607 NPY4RP50391 375 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 ADPRHP54922 357 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 ERVFC1P60507 584 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 SYPL1Q16563 259 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 TUSC1Q2TAM9 212 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 NLRP8Q86W28 1048 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 ZDHHC23Q8IYP9 409 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 OR51H1Q8NH63 302 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 NKX1-2Q9UD57 310 aaPredicted RBP10.26□□□□□ -0.77
SCN4A-201ENST00000435607 H7C1C5 153 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 MITFO75030 526 aaPredicted RBP10.26□□□□□ -0.77
SCN4A-201ENST00000435607 AKR7A3O95154 331 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 FECHP22830 423 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 NKX2-1P43699 371 aaPredicted RBP10.26□□□□□ -0.77
SCN4A-201ENST00000435607 HYAL4Q2M3T9 481 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 SCD5Q86SK9 330 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 PDLIM5Q96HC4 596 aaKnown RBP10.26□□□□□ -0.77
SCN4A-201ENST00000435607 RCE1Q9Y256 329 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 TMEM200CA6NKL6 621 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 H0YIG0 161 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 RPL27P61353 136 aaKnown RBP10.26□□□□□ -0.77
SCN4A-201ENST00000435607 HBA1P69905 142 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 SMAGPQ0VAQ4 97 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 IAH1Q2TAA2 248 aaPredicted RBP10.26□□□□□ -0.77
SCN4A-201ENST00000435607 BEX5Q5H9J7 111 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 ANGPTL5Q86XS5 388 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 PTTG3PQ9NZH4 202 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 RFXAPO00287 272 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 CSO75390 466 aaKnown RBP10.26□□□□□ -0.77
SCN4A-201ENST00000435607 PRRX1P54821 245 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 GLIPR1L1Q6UWM5 242 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 DTWD1Q8N5C7 304 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 TMEM56Q96MV1 263 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 LINC01553A4QN01 128 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 H0YIV9 168 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 NXPH3O95157 252 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 GSCP56915 257 aaPredicted RBP10.26□□□□□ -0.77
SCN4A-201ENST00000435607 SHHQ15465 462 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 NMNAT3Q96T66 252 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 DHRS4Q9BTZ2 278 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 WDR61Q9GZS3 305 aaKnown RBP10.26□□□□□ -0.77
SCN4A-201ENST00000435607 LHPPQ9H008 270 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 CLMPQ9H6B4 373 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 GPR55Q9Y2T6 319 aaPredicted RBP10.26□□□□□ -0.77
SCN4A-201ENST00000435607 POU3F3P20264 500 aaPredicted RBP10.26□□□□□ -0.77
SCN4A-201ENST00000435607 GGTA1PQ4G0N0 100 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 SLC37A2Q8TED4 501 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 TNFRSF13CQ96RJ3 184 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 CTDSP1Q9GZU7 261 aa10.26□□□□□ -0.77
SCN4A-201ENST00000435607 APC2O95996 2303 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 KNTC1P50748 2209 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 KRBOX1C9JBD0 128 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 LY86O95711 162 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 TMEM52BQ4KMG9 183 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 EMC4Q5J8M3 183 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 ANKRD16Q6P6B7 361 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 OR2M3Q8NG83 312 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 RPEQ96AT9 228 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 MVB12AQ96EY5 273 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 TAS2R5Q9NYW4 299 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 CLCF1Q9UBD9 225 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 SLC23A1Q9UHI7 598 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 V9GYS6 101 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 EPHA2P29317 976 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 SOX18P35713 384 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 SORDQ00796 357 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 FADS6Q8N9I5 356 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 OR5R1Q8NH85 324 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 RNF32Q9H0A6 362 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 OR51I2Q9H344 312 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 OR51B4Q9Y5P0 310 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 MBLAC1A4D2B0 266 aaPredicted RBP10.25□□□□□ -0.77
SCN4A-201ENST00000435607 SIRPB1O00241 398 aa10.25□□□□□ -0.77
SCN4A-201ENST00000435607 ADAM12O43184 909 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms