RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 RALBP11234 206 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 ZNF19P17023 458 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 CCT6AP40227 531 aaKnown RBP4.15□□□□□ -1.75
USP54-206ENST00000433394 EIF3EP60228 445 aaKnown RBP4.15□□□□□ -1.75
USP54-206ENST00000433394 STXBP1P61764 594 aaKnown RBP4.15□□□□□ -1.75
USP54-206ENST00000433394 SGCAQ16586 387 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 C1orf185Q5T7R7 199 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 TMCO2Q7Z6W1 182 aaPredicted RBP4.15□□□□□ -1.75
USP54-206ENST00000433394 TTC29Q8NA56 475 aaPredicted RBP4.15□□□□□ -1.75
USP54-206ENST00000433394 OR10R2Q8NGX6 335 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 OR5B3Q8NH48 314 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 BLOC1S5Q8TDH9 187 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 MYDGFQ969H8 173 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 IL22RA2Q969J5 263 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 AURKBQ96GD4 344 aaPredicted RBP4.15□□□□□ -1.75
USP54-206ENST00000433394 FAM210BQ96KR6 192 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 SERPINB12Q96P63 405 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 TSSK3Q96PN8 268 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 XPO6Q96QU8 1125 aaKnown RBP4.15□□□□□ -1.75
USP54-206ENST00000433394 GABARAPL3Q9BY60 117 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 OR51M1Q9H341 326 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 CCDC59Q9P031 241 aaKnown RBP4.15□□□□□ -1.75
USP54-206ENST00000433394 RPS6KB2Q9UBS0 482 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 LGALS13Q9UHV8 139 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 SAR1BQ9Y6B6 198 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 IQGAP1P46940 1657 aa4.15□□□□□ -1.75
USP54-206ENST00000433394 KTN1Q86UP2 1357 aaKnown RBP4.14□□□□□ -1.75
USP54-206ENST00000433394 PIK3R4Q99570 1358 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 TMEM2Q9UHN6 1383 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 MYO5BQ9ULV0 1848 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 KIR2DL5BA0A0G2JN68 375 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 KIR2DL5BA0A0G2JPC4 375 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 A0A1B0GVI7 797 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 NKX2-6A6NCS4 301 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 A6NDX4 124 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 NCF1BA6NI72 391 aaPredicted RBP4.14□□□□□ -1.75
USP54-206ENST00000433394 ZNF726A6NNF4 738 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 NCF1CA8MVU1 366 aaPredicted RBP4.14□□□□□ -1.75
USP54-206ENST00000433394 LAD1O00515 517 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 SERPINA5P05154 406 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 STAG3L3P0CL85 134 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 CCNB1P14635 433 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 STOMP27105 288 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 NUTF2P61970 127 aaKnown RBP4.14□□□□□ -1.75
USP54-206ENST00000433394 RPS21P63220 83 aaKnown RBP4.14□□□□□ -1.75
USP54-206ENST00000433394 TMED1Q13445 227 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 MPPED2Q15777 294 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 PSMD5Q16401 504 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 BEX5Q5H9J7 111 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 THEM4Q5T1C6 240 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 ACP7Q6ZNF0 438 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 COX15Q7KZN9 410 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 KIR2DL5AQ8N109 375 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 Q8N9W7 124 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 KIR2DL5BQ8NHK3 375 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 RDH5Q92781 318 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 ECHDC3Q96DC8 303 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 CWH43Q9H720 699 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 TMEM165Q9HC07 324 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 KCNJ16Q9NPI9 418 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 DDX18Q9NVP1 670 aaKnown RBP4.14□□□□□ -1.75
USP54-206ENST00000433394 CACNG2Q9Y698 323 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 DLC1Q96QB1 1528 aa4.14□□□□□ -1.75
USP54-206ENST00000433394 CEP170BQ9Y4F5 1589 aaPredicted RBP4.14□□□□□ -1.75
USP54-206ENST00000433394 RIMS1Q86UR5 1692 aaKnown RBP4.13□□□□□ -1.75
USP54-206ENST00000433394 TRBV9A0A0B4J1U6 114 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 ZNF816-ZNF321PA0A0X1KG74 233 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 CIB4A0PJX0 185 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 SUPT3HB4E1H0 165 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 RAB3DO95716 219 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 AIFM1O95831 613 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 SLC25A27O95847 323 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 TSPAN13O95857 204 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 PLEKP08567 350 aaPredicted RBP4.13□□□□□ -1.75
USP54-206ENST00000433394 ACSM4P0C7M7 580 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 ZDHHC11BP0C7U3 371 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 OR8G3PP0DMU2 310 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 IGHV3-43DP0DP04 118 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 ELK1P19419 428 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 CNR1P21554 472 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 F2RP25116 425 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 DAZ2Q13117 558 aaKnown RBP4.13□□□□□ -1.75
USP54-206ENST00000433394 UNC119Q13432 240 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 IL34Q6ZMJ4 242 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 TMEM150AQ86TG1 271 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 KATNAL2Q8IYT4 538 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 CMTM1Q8IZ96 169 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 OFCC1Q8IZS5 231 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 JAGN1Q8N5M9 183 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 NPBQ8NG41 125 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 OR51G1Q8NGK1 321 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 EXOSC8Q96B26 276 aaKnown RBP4.13□□□□□ -1.75
USP54-206ENST00000433394 FAM3DQ96BQ1 224 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 DNAJC19Q96DA6 116 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 DNTTIP1Q9H147 329 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 DAZ3Q9NR90 486 aaKnown RBP4.13□□□□□ -1.75
USP54-206ENST00000433394 FAM49BQ9NUQ9 324 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 ZNF629Q9UEG4 869 aaPredicted RBP4.13□□□□□ -1.75
USP54-206ENST00000433394 CELA1Q9UNI1 258 aa4.13□□□□□ -1.75
USP54-206ENST00000433394 CENPJQ9HC77 1338 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms