RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 SH3YL1Q96HL8 342 aaPredicted RBP2.09□□□□□ -2.07
CLK1-204ENST00000432425 HPDLQ96IR7 371 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 RNF145Q96MT1 663 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 TGM7Q96PF1 710 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 SRRQ9GZT4 340 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 TPK1Q9H3S4 243 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 C1orf198Q9H425 327 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 KAT8Q9H7Z6 458 aaKnown RBP2.09□□□□□ -2.07
CLK1-204ENST00000432425 MCCC2Q9HCC0 563 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 CD209Q9NNX6 404 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 ADAP2Q9NPF8 381 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 PRSS16Q9NQE7 514 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 BATF3Q9NR55 127 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 SIRT7Q9NRC8 400 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 TAS2R9Q9NYW1 312 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 NXT1Q9UKK6 140 aaKnown RBP2.09□□□□□ -2.07
CLK1-204ENST00000432425 FZR1Q9UM11 496 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 EIF3LQ9Y262 564 aaKnown RBP2.09□□□□□ -2.07
CLK1-204ENST00000432425 POLDIP2Q9Y2S7 368 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 V9GYQ6 96 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 LRPPRCP42704 1394 aaKnown RBP2.09□□□□□ -2.07
CLK1-204ENST00000432425 RFX7Q2KHR2 1363 aa2.09□□□□□ -2.07
CLK1-204ENST00000432425 ATP10AO60312 1499 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 GNG14A0A1W2PPG7 69 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 A8MUA0 341 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 E7EWF7 191 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 H3BN98 237 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 SGK494L7N484 410 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 RFXANKO14593 260 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 RAB29O14966 203 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 ZBTB5O15062 677 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 AQP9O43315 295 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 NDUFA2O43678 99 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 AIREO43918 545 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 SC5DO75845 299 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 TOXO94900 526 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 DHFRP00374 187 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 SEMG1P04279 462 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 SERPIND1P05546 499 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 OCMP0CE72 109 aaPredicted RBP2.09□□□□□ -2.08
CLK1-204ENST00000432425 ATP1B2P14415 290 aaPredicted RBP2.09□□□□□ -2.08
CLK1-204ENST00000432425 TNNI1P19237 187 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 EIF2S2P20042 333 aaKnown RBP2.09□□□□□ -2.08
CLK1-204ENST00000432425 MMP11P24347 488 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 STOMP27105 288 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 MAS1LP35410 378 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 UGT2B10P36537 528 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 TGFBR2P37173 567 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 RAP1GDS1P52306 607 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 PLK1P53350 603 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 ATP1B3P54709 279 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 NAPAP54920 295 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 MRPS25P82663 173 aaKnown RBP2.09□□□□□ -2.08
CLK1-204ENST00000432425 PITPNAQ00169 270 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 BNIP2Q12982 314 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 KCNJ11Q14654 390 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 KCTD19Q17RG1 926 aaPredicted RBP2.09□□□□□ -2.08
CLK1-204ENST00000432425 C3orf33Q6P1S2 294 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 Q6ZSR3 168 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 PPP1R27Q86WC6 154 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 CYP4Z2PQ8N1L4 340 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 TRAM1L1Q8N609 369 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 TMEM156Q8N614 296 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 OR2L8Q8NGY9 312 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 TCP10LQ8TDR4 215 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 CA5BP1Q8WTZ4 195 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 LZICQ8WZA0 190 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 CCDC42Q96M95 316 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 KLHDC3Q9BQ90 382 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 NDUFAF3Q9BU61 184 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 BCL2L14Q9BZR8 327 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 C6orf62Q9GZU0 229 aaPredicted RBP2.09□□□□□ -2.08
CLK1-204ENST00000432425 OR51J1Q9H342 316 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 WDR54Q9H977 334 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 ASCL3Q9NQ33 180 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 CYTL1Q9NRR1 136 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 C19orf12Q9NSK7 152 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 DUS2Q9NX74 493 aaKnown RBP2.09□□□□□ -2.08
CLK1-204ENST00000432425 SIGLEC8Q9NYZ4 499 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 IFNKQ9P0W0 207 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 UVRAGQ9P2Y5 699 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 BCAP29Q9UHQ4 241 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 ANAPC7Q9UJX3 599 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 RAB23Q9ULC3 237 aa2.09□□□□□ -2.08
CLK1-204ENST00000432425 PRG3Q9Y2Y8 225 aaPredicted RBP2.09□□□□□ -2.08
CLK1-204ENST00000432425 PPIAL4EA0A075B759 164 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 A0A1W2PQL4 384 aaPredicted RBP2.08□□□□□ -2.08
CLK1-204ENST00000432425 RNASEK-C17orf49H0YIS7 233 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 RAMP1O60894 148 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 HUS1O60921 280 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 F10P00742 488 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 ASS1P00966 412 aaKnown RBP2.08□□□□□ -2.08
CLK1-204ENST00000432425 IGF1P05019 195 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 PPIAL4FP0DN26 164 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 CBR1P16152 277 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 NPR2P20594 1047 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 DTYMKP23919 212 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 CD82P27701 267 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 SERPINB1P30740 379 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 CALCRP30988 508 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms