RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 ERVS71-1P61550 626 aa13.17□□□□□ -0.3
RPL28-204ENST00000431533 SRSF2Q01130 221 aaKnown RBP13.17□□□□□ -0.3
RPL28-204ENST00000431533 KRR1Q13601 381 aaKnown RBP13.17□□□□□ -0.3
RPL28-204ENST00000431533 RGS7BPQ6MZT1 257 aaPredicted RBP13.17□□□□□ -0.3
RPL28-204ENST00000431533 THSD4Q6ZMP0 1018 aa13.17□□□□□ -0.3
RPL28-204ENST00000431533 RINLQ6ZS11 566 aa13.17□□□□□ -0.3
RPL28-204ENST00000431533 ZDHHC21Q8IVQ6 265 aa13.17□□□□□ -0.3
RPL28-204ENST00000431533 CPEB3Q8NE35 698 aaKnown RBP13.17□□□□□ -0.3
RPL28-204ENST00000431533 OR1J2Q8NGS2 313 aa13.17□□□□□ -0.3
RPL28-204ENST00000431533 UBASH3BQ8TF42 649 aa13.17□□□□□ -0.3
RPL28-204ENST00000431533 DHRS1Q96LJ7 313 aa13.17□□□□□ -0.3
RPL28-204ENST00000431533 EMC7Q9NPA0 242 aa13.17□□□□□ -0.3
RPL28-204ENST00000431533 MYEF2Q9P2K5 600 aaKnown RBP13.17□□□□□ -0.3
RPL28-204ENST00000431533 SIGLEC7Q9Y286 467 aa13.17□□□□□ -0.3
RPL28-204ENST00000431533 IER3IP1Q9Y5U9 82 aa13.17□□□□□ -0.3
RPL28-204ENST00000431533 SLC22A23A1A5C7 686 aa13.16□□□□□ -0.3
RPL28-204ENST00000431533 LRP5LA4QPB2 252 aa13.16□□□□□ -0.3
RPL28-204ENST00000431533 SYNGR3O43761 229 aa13.16□□□□□ -0.3
RPL28-204ENST00000431533 MGRN1O60291 552 aa13.16□□□□□ -0.3
RPL28-204ENST00000431533 PPP1R3DO95685 299 aa13.16□□□□□ -0.3
RPL28-204ENST00000431533 MSR1P21757 451 aa13.16□□□□□ -0.3
RPL28-204ENST00000431533 STOMP27105 288 aa13.16□□□□□ -0.3
RPL28-204ENST00000431533 DVL1P1P54792 670 aaPredicted RBP13.16□□□□□ -0.3
RPL28-204ENST00000431533 OTPQ5XKR4 325 aa13.16□□□□□ -0.3
RPL28-204ENST00000431533 FAM122BQ7Z309 247 aa13.16□□□□□ -0.3
RPL28-204ENST00000431533 TEX29Q8N6K0 151 aa13.16□□□□□ -0.3
RPL28-204ENST00000431533 FANK1Q8TC84 345 aa13.16□□□□□ -0.3
RPL28-204ENST00000431533 ZFAND2BQ8WV99 257 aa13.16□□□□□ -0.3
RPL28-204ENST00000431533 GPA33Q99795 319 aa13.16□□□□□ -0.3
RPL28-204ENST00000431533 REV1Q9UBZ9 1251 aa13.16□□□□□ -0.3
RPL28-204ENST00000431533 TMCC3Q9ULS5 477 aa13.16□□□□□ -0.3
RPL28-204ENST00000431533 PRSS37A4D1T9 235 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 C5orf49A4QMS7 147 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 B4DSR2 109 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 LYNX1G3V0Z9 82 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 IMPA2O14732 288 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 LILRA1O75019 489 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 PTP4A3O75365 173 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 CLPTM1O96005 669 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 IGFBP1P08833 259 aaPredicted RBP13.15□□□□□ -0.3
RPL28-204ENST00000431533 CST2P09228 141 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 LYNX1P0DP58 116 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 CALB2P22676 271 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 SDHAP31040 664 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 GDI2P50395 445 aaKnown RBP13.15□□□□□ -0.3
RPL28-204ENST00000431533 CDH15P55291 814 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 FXYD6P3P58550 94 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 PSG4Q00888 419 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 GLO1Q04760 184 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 NKPD1Q17RQ9 610 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 SPATS1Q496A3 300 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 FAM27BQ5VT28 67 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 SMARCD3Q6STE5 483 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 ZER1Q7Z7L7 766 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 OR1J1Q8NGS3 322 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 SNX18Q96RF0 628 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 FUZQ9BT04 418 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 ZNF416Q9BWM5 594 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 OR2H1Q9GZK4 316 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 SYT4Q9H2B2 425 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 MS4A5Q9H3V2 200 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 OCEL1Q9H607 264 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 IL1RAPQ9NPH3 570 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 NRIP3Q9NQ35 241 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 POLE4Q9NR33 117 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 ACTR3BQ9P1U1 418 aa13.15□□□□□ -0.3
RPL28-204ENST00000431533 SLC16A7O60669 478 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 SNAP29O95721 258 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 SCG5P05408 212 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 NAT2P11245 290 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 CTLA4P16410 223 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 RAD52P43351 418 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 CENPAP49450 140 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 EVX1P49640 407 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 RPS6KA3P51812 740 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 UCP2P55851 309 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 SELENOVP59797 346 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 ENDOGQ14249 297 aaKnown RBP13.14□□□□□ -0.31
RPL28-204ENST00000431533 SPATA46Q5T0L3 261 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 GPR139Q6DWJ6 353 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 ZNF774Q6NX45 483 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 DPY19L2P2Q6ZN68 376 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 FOXL2NBQ6ZUU3 175 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.14□□□□□ -0.31
RPL28-204ENST00000431533 GLCCI1Q86VQ1 547 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 DHFR2Q86XF0 187 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 ALDH16A1Q8IZ83 802 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 SYNPRQ8TBG9 265 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 CCDC124Q96CT7 223 aaKnown RBP13.14□□□□□ -0.31
RPL28-204ENST00000431533 ZMYND19Q96E35 227 aaPredicted RBP13.14□□□□□ -0.31
RPL28-204ENST00000431533 ERMAPQ96PL5 475 aaPredicted RBP13.14□□□□□ -0.31
RPL28-204ENST00000431533 BCL2L14Q9BZR8 327 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 WNT5BQ9H1J7 359 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 OR52D1Q9H346 318 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 TAAR3PQ9P1P4 343 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 GRIP1Q9Y3R0 1128 aa13.14□□□□□ -0.31
RPL28-204ENST00000431533 LOC100509620A0A075B734 347 aa13.13□□□□□ -0.31
RPL28-204ENST00000431533 C12orf71A8MTZ7 269 aa13.13□□□□□ -0.31
RPL28-204ENST00000431533 KHDRBS3O75525 346 aaKnown RBP13.13□□□□□ -0.31
RPL28-204ENST00000431533 SLC6A6P31641 620 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms