RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 MTNR1AP48039 350 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 ZNF91Q05481 1191 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 ENDOGQ14249 297 aaKnown RBP9.62□□□□□ -0.87
CHD4-202ENST00000430771 TAB1Q15750 504 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 MEP1BQ16820 701 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 SLC16A9Q7RTY1 509 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 BCDIN3DQ7Z5W3 292 aaKnown RBP9.62□□□□□ -0.87
CHD4-202ENST00000430771 SKA3Q8IX90 412 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 ZNF511Q8NB15 262 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 CNIH3Q8TBE1 160 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 FBLIM1Q8WUP2 373 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 HTRA1Q92743 480 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 CNBD2Q96M20 576 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 MNTQ99583 582 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 TEAD3Q99594 435 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 SH3GL3Q99963 347 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 C1orf198Q9H425 327 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 ASH2LQ9UBL3 628 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 RPL36Q9Y3U8 105 aaKnown RBP9.62□□□□□ -0.87
CHD4-202ENST00000430771 SLC25A15Q9Y619 301 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 FLNCQ14315 2725 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 DOPEY1Q5JWR5 2465 aa9.62□□□□□ -0.87
CHD4-202ENST00000430771 A0A1W2PR80 420 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 DOK2O60496 412 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 SELENOFO60613 162 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 WBP4O75554 376 aaKnown RBP9.61□□□□□ -0.87
CHD4-202ENST00000430771 MPZL1O95297 269 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 PTHP01270 115 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 HLA-HP01893 362 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 MRPL3P09001 348 aaKnown RBP9.61□□□□□ -0.87
CHD4-202ENST00000430771 DBTP11182 482 aaKnown RBP9.61□□□□□ -0.87
CHD4-202ENST00000430771 ZNF32P17041 273 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 IGFBP2P18065 325 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 NUDT6P53370 316 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 ACTC1P68032 377 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 ACTA1P68133 377 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 TUBA1BP68363 451 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 TUBA4AP68366 448 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 PLP2Q04941 152 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 RAB35Q15286 201 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 C3orf36Q3SXR2 165 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 TEX30Q5JUR7 227 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 SLC18B1Q6NT16 456 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 LYPD4Q6UWN0 246 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 TUBA1AQ71U36 451 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 MDP1Q86V88 176 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 WFDC8Q8IUA0 241 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 TIGD4Q8IY51 512 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 ALDH16A1Q8IZ83 802 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 FAM169BQ8N8A8 192 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 ZNF454Q8N9F8 522 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 WDR31Q8NA23 367 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 GJC3Q8NFK1 279 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 OR51G2Q8NGK0 314 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 ZNRF4Q8WWF5 429 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 UBE2FQ969M7 185 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 RNFT2Q96EX2 444 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 ZC3HAV1LQ96H79 300 aaKnown RBP9.61□□□□□ -0.87
CHD4-202ENST00000430771 DACH2Q96NX9 599 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 MYCBPQ99417 103 aaPredicted RBP9.61□□□□□ -0.87
CHD4-202ENST00000430771 YIPF3Q9GZM5 350 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 HDHD2Q9H0R4 259 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 WDR76Q9H967 626 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 ADGRL4Q9HBW9 690 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 PLEK2Q9NYT0 353 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 ZNF224Q9NZL3 707 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 CYB5R1Q9UHQ9 305 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 ATPIF1Q9UII2 106 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 BLOC1S6Q9UL45 172 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 PCDHGB1Q9Y5G3 927 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 TIMM10BQ9Y5J6 103 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 LHFPL6Q9Y693 200 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 TMEM14AQ9Y6G1 99 aa9.61□□□□□ -0.87
CHD4-202ENST00000430771 TENM4Q6N022 2769 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 IQCMA0A1B0GVH7 501 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 C19orf84I3L1E1 186 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 ZNF593O00488 134 aaPredicted RBP9.6□□□□□ -0.87
CHD4-202ENST00000430771 CASKO14936 926 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 SGCEO43556 437 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 DENRO43583 198 aaKnown RBP9.6□□□□□ -0.87
CHD4-202ENST00000430771 FAM20BO75063 409 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 GOSR1O95249 250 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 IGKV3-15P01624 115 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 SCG5P05408 212 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 LYNP07948 512 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 MMP7P09237 267 aaPredicted RBP9.6□□□□□ -0.87
CHD4-202ENST00000430771 SBK2P0C263 348 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 CBR1P16152 277 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 KIR2DL3P43628 341 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 IDH3GP51553 393 aaPredicted RBP9.6□□□□□ -0.87
CHD4-202ENST00000430771 CXCR4P61073 352 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 RAB1AP62820 205 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 CSNK2BP67870 215 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 DBPQ10586 325 aaPredicted RBP9.6□□□□□ -0.87
CHD4-202ENST00000430771 RAB40BQ12829 278 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 CDK5R2Q13319 367 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 MED21Q13503 144 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 EIF2B1Q14232 305 aaKnown RBP9.6□□□□□ -0.87
CHD4-202ENST00000430771 PCK2Q16822 640 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 UGT2A3Q6UWM9 527 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms