RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 B3GNT2Q9NY97 397 aa14.66□□□□□ -0.06
UBE3D-204ENST00000430071 KIAA1324LA8MWY0 1029 aaPredicted RBP14.65□□□□□ -0.06
UBE3D-204ENST00000430071 H7C417 338 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 EI24O14681 340 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 PATE4P0C8F1 98 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 CBR1P16152 277 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 IGFBP5P24593 272 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 PIGFQ07326 219 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 DBPQ10586 325 aaPredicted RBP14.65□□□□□ -0.06
UBE3D-204ENST00000430071 ADIPOQQ15848 244 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 MSMPQ1L6U9 139 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 ZNF362Q5T0B9 420 aaPredicted RBP14.65□□□□□ -0.06
UBE3D-204ENST00000430071 ACSM5Q6NUN0 579 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 SLC25A47Q6Q0C1 308 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 CBR4Q8N4T8 237 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 OR2T33Q8NG76 320 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 OR4K13Q8NH42 304 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 MS4A3Q96HJ5 214 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 SORCS2Q96PQ0 1159 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 BARX1Q9HBU1 254 aaPredicted RBP14.65□□□□□ -0.06
UBE3D-204ENST00000430071 CA10Q9NS85 328 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 VSX1Q9NZR4 365 aaPredicted RBP14.65□□□□□ -0.06
UBE3D-204ENST00000430071 UGT2A1Q9Y4X1 527 aa14.65□□□□□ -0.06
UBE3D-204ENST00000430071 IGHV2OR16-5A0A0B4J2B6 119 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 RRP9O43818 475 aaKnown RBP14.64□□□□□ -0.07
UBE3D-204ENST00000430071 CRYAAP02489 173 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 ALPLP05186 524 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 HOXB1P14653 301 aaPredicted RBP14.64□□□□□ -0.07
UBE3D-204ENST00000430071 EPHA2P29317 976 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 NOS3P29474 1203 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 CAPZA2P47755 286 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 GIPRP48546 466 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 CRISP1P54107 249 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 CDK5Q00535 292 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 DAG1Q14118 895 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 GINS1Q14691 196 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 THEM4Q5T1C6 240 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 C10orf128Q5T292 105 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 C1QTNF12Q5T7M4 302 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 TMEM236Q5W0B7 351 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 LEG1Q6P5S2 330 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 ZNF813Q6ZN06 617 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 SDR9C7Q8NEX9 313 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 RBP7Q96R05 134 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 NMNAT3Q96T66 252 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 SLC29A1Q99808 456 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 RBM4BQ9BQ04 359 aaKnown RBP14.64□□□□□ -0.07
UBE3D-204ENST00000430071 RHNO1Q9BSD3 238 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 RBM4Q9BWF3 364 aaKnown RBP14.64□□□□□ -0.07
UBE3D-204ENST00000430071 SYT4Q9H2B2 425 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 USE1Q9NZ43 259 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 BAIAP2Q9UQB8 552 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 CUBNO60494 3623 aa14.64□□□□□ -0.07
UBE3D-204ENST00000430071 COL6A5A8TX70 2615 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 TMEM129A0AVI4 362 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 AHCYL1O43865 530 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 B4GALT1P15291 398 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 CTLA4P16410 223 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 THBS4P35443 961 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 POLR2IP36954 125 aaKnown RBP14.63□□□□□ -0.07
UBE3D-204ENST00000430071 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.63□□□□□ -0.07
UBE3D-204ENST00000430071 C3orf36Q3SXR2 165 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 SLC27A4Q6P1M0 643 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 ZNF627Q7L945 461 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 JAZF1Q86VZ6 243 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 ZCCHC24Q8N2G6 241 aaKnown RBP14.63□□□□□ -0.07
UBE3D-204ENST00000430071 NPEPL1Q8NDH3 523 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 OR52E2Q8NGJ4 325 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 NSMAFQ92636 917 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 TSSK2Q96PF2 358 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 DDOQ99489 341 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 FOXB1Q99853 325 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 KCNS3Q9BQ31 491 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 C9orf16Q9BUW7 83 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 DCLRE1BQ9H816 532 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 SLC25A19Q9HC21 320 aa14.63□□□□□ -0.07
UBE3D-204ENST00000430071 NKX1-2Q9UD57 310 aaPredicted RBP14.63□□□□□ -0.07
UBE3D-204ENST00000430071 FBN1P35555 2871 aaKnown RBP14.63□□□□□ -0.07
UBE3D-204ENST00000430071 OR6C68A6NDL8 312 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 DCTN6O00399 190 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 OR4A8P0C604 315 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 CD79AP11912 226 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 NR2C1P13056 603 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 CDAP32320 146 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 GRK5P34947 590 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 SERPINF1P36955 418 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 ALDH3A2P51648 485 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 ESRRGP62508 458 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 PTGES3Q15185 160 aaKnown RBP14.62□□□□□ -0.07
UBE3D-204ENST00000430071 ZBTB49Q6ZSB9 765 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 FAM169BQ8N8A8 192 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 CYB561A3Q8NBI2 242 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 SLC37A3Q8NCC5 494 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 FNDC8Q8TC99 324 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 C10orf105Q8TEF2 133 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 SNX18Q96RF0 628 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 NUAK2Q9H093 628 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 FN3KQ9H479 309 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 TMEM38BQ9NVV0 291 aa14.62□□□□□ -0.07
UBE3D-204ENST00000430071 SLC16A7O60669 478 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms