RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 ARAFP10398 606 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 ITGAMP11215 1152 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 NID1P14543 1247 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 AKR1C4P17516 323 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 PRKAR1BP31321 381 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 EIF2B2P49770 351 aaKnown RBP6.54□□□□□ -1.36
CNOT4-206ENST00000428680 TLE1Q04724 770 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 DMTNQ08495 405 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 ARL16Q0P5N6 197 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 DBPQ10586 325 aaPredicted RBP6.54□□□□□ -1.36
CNOT4-206ENST00000428680 MPPED2Q15777 294 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 C3AR1Q16581 482 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 SOWAHCQ53LP3 525 aaPredicted RBP6.54□□□□□ -1.36
CNOT4-206ENST00000428680 MOB3BQ86TA1 216 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 LACC1Q8IV20 430 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 ALG14Q96F25 216 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 PIMREGQ9BSJ6 248 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 EGLN3Q9H6Z9 239 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 HES4Q9HCC6 221 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 FAM60AQ9NP50 221 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 SDR39U1Q9NRG7 319 aaPredicted RBP6.54□□□□□ -1.36
CNOT4-206ENST00000428680 EXO1Q9UQ84 846 aaKnown RBP6.54□□□□□ -1.36
CNOT4-206ENST00000428680 CACNA1IQ9P0X4 2223 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 AHRRA9YTQ3 701 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 M0R135 149 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 PPP6CO00743 305 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 SH2D1BO14796 132 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 TMPRSS11DO60235 418 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 CTSVO60911 334 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 CDRT1O95170 752 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 ADH4P08319 380 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 RPL5P46777 297 aaKnown RBP6.54□□□□□ -1.36
CNOT4-206ENST00000428680 RPL27P61353 136 aaKnown RBP6.54□□□□□ -1.36
CNOT4-206ENST00000428680 PMP22Q01453 160 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 SPOCK1Q08629 439 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 ZNF791Q3KP31 576 aaPredicted RBP6.54□□□□□ -1.36
CNOT4-206ENST00000428680 ZNF658BQ4V348 819 aaPredicted RBP6.54□□□□□ -1.36
CNOT4-206ENST00000428680 ACSM3Q53FZ2 586 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 TMEM99Q8N816 258 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 SEMA6DQ8NFY4 1073 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 THAP6Q8TBB0 222 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 CHPT1Q8WUD6 406 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 SLC38A5Q8WUX1 472 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 SLCO4A1Q96BD0 722 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 TLCD1Q96CP7 247 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 ZNF799Q96GE5 643 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 SDF2Q99470 211 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 SPIN2AQ99865 258 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 SPIN2BQ9BPZ2 258 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 ALG12Q9BV10 488 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 MED28Q9H204 178 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 MOKQ9UQ07 419 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 NYNRINQ9P2P1 1898 aaKnown RBP6.54□□□□□ -1.36
CNOT4-206ENST00000428680 A0A087WV62 115 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 OR6C6A6NF89 314 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 PAX7P23759 505 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 COX7A1P24310 79 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 SERPINF1P36955 418 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 NAAAQ02083 359 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 MVKQ03426 396 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 XKR7Q5GH72 579 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 ATP1A1-AS1Q5TC04 95 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 TRIM63Q969Q1 353 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 UPRTQ96BW1 309 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 FOXRED1Q96CU9 486 aaPredicted RBP6.54□□□□□ -1.36
CNOT4-206ENST00000428680 FUZQ9BT04 418 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 ZNF286AQ9HBT8 521 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 MED17Q9NVC6 651 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 PTTG3PQ9NZH4 202 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 MBD2Q9UBB5 411 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 NCOR2Q9Y618 2525 aa6.54□□□□□ -1.36
CNOT4-206ENST00000428680 TRGV10A0A0A0MS01 117 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 A0A0B4J203 849 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 SMIM30A4D0T7 59 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 XRCC2O43543 280 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 CREBL2O60519 120 aaPredicted RBP6.53□□□□□ -1.36
CNOT4-206ENST00000428680 FABP1P07148 127 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 MAGEA6P43360 314 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 DIO1P49895 249 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 ZNF628Q5EBL2 1059 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 PIGGQ5H8A4 983 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 COQ5Q5HYK3 327 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 NXNL2Q5VZ03 156 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 USP51Q70EK9 711 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 SAMD12Q8N8I0 201 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 OR2M7Q8NG81 312 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 NT5CQ8TCD5 201 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 CORO2AQ92828 525 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 LRFN5Q96NI6 719 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 BARD1Q99728 777 aaKnown RBP6.53□□□□□ -1.36
CNOT4-206ENST00000428680 RIMS4Q9H426 269 aaPredicted RBP6.53□□□□□ -1.36
CNOT4-206ENST00000428680 EMC7Q9NPA0 242 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 MED29Q9NX70 200 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 OR14I1A6ND48 311 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 SYT5O00445 386 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 SSX4O60224 188 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 APEHP13798 732 aaKnown RBP6.53□□□□□ -1.36
CNOT4-206ENST00000428680 STOMP27105 288 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 CD96P40200 585 aa6.53□□□□□ -1.36
CNOT4-206ENST00000428680 CX3CR1P49238 355 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms