RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ARHGDIAP52565 204 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 BTG1P62324 171 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 ZMYND11Q15326 602 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 ESCO2Q56NI9 601 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 ARMC4Q5T2S8 1044 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 SPATC1Q76KD6 591 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 LRRC28Q86X40 367 aaPredicted RBP15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 ZNF283Q8N7M2 679 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 OR52E2Q8NGJ4 325 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 PFN4Q8NHR9 129 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 HDAC2Q92769 488 aaKnown RBP15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 PARD6BQ9BYG5 372 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 OR2H1Q9GZK4 316 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 ELOVL3Q9HB03 270 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 A0A0G2JK05 382 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 A8MXK9 166 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 MT-ND1P03886 318 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 IGHV4-38-2P0DP08 117 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 PSG7Q13046 419 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 CDK5R2Q13319 367 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 RUNDC3AQ59EK9 446 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 ZNF774Q6NX45 483 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 DLEU7Q6UYE1 221 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 ZER1Q7Z7L7 766 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 JAZF1Q86VZ6 243 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 PARP8Q8N3A8 854 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 OR2Z1Q8NG97 314 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 MOSPD2Q8NHP6 518 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 SLC26A7Q8TE54 656 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 TMIGD2Q96BF3 282 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 NMD3Q96D46 503 aaKnown RBP15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 SGTBQ96EQ0 304 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 C4orf45Q96LM5 186 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 PRSS27Q9BQR3 290 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 EBF4Q9BQW3 602 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 PCDHAC1Q9H158 963 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 NANOGQ9H9S0 305 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 SOX21Q9Y651 276 aaPredicted RBP15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 DOCK11Q5JSL3 2073 aa15.4■□□□□ 0.06
UPK3BP1-201ENST00000428678 GMNCA6NCL1 334 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 F5H0A9 414 aaPredicted RBP15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 TGDSO95455 350 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 NR2C1P13056 603 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 TNFRSF1AP19438 455 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 LAP3P28838 519 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 CD80P33681 288 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 IDH3AP50213 366 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 SLC18A1P54219 525 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 MTPNP58546 118 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 MAGOHP61326 146 aaKnown RBP15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 TOP3AQ13472 1001 aaPredicted RBP15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 FAM27BQ5VT28 67 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 ARL9Q6T311 187 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 DHDDSQ86SQ9 333 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 PATL1Q86TB9 770 aaKnown RBP15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 TAMM41Q96BW9 452 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 SAMD8Q96LT4 415 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 PPP1R3CQ9UQK1 317 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 TIMM10BQ9Y5J6 103 aa15.39■□□□□ 0.05
UPK3BP1-201ENST00000428678 ICMTO60725 284 aa15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 ABHD16AO95870 558 aa15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 CST2P09228 141 aa15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 GSTM3P21266 225 aa15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 MDH2P40926 338 aaKnown RBP15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 GUCA1AP43080 201 aaPredicted RBP15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 PCBD1P61457 104 aa15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 PAX8Q06710 450 aa15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 SELPLGQ14242 412 aa15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 C16orf87Q6PH81 154 aa15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 SLC25A47Q6Q0C1 308 aa15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 NKAIN4Q8IVV8 208 aa15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 TMEM255BQ8WV15 326 aa15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 ITLN1Q8WWA0 313 aa15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 TXNIPQ9H3M7 391 aa15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 C20orf141Q9NUB4 165 aa15.38■□□□□ 0.05
UPK3BP1-201ENST00000428678 MDFIC2A0A1B0GVS7 189 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 CEACAM18A8MTB9 384 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 ERLIN1O75477 346 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 KNG1P01042 644 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 RBM34P42696 430 aaKnown RBP15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 TAS2R41P59536 307 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 LAPTM4AQ15012 233 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 BTNL3Q6UXE8 466 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 Q6ZR03 302 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 C9orf139Q6ZV77 190 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 SLC30A8Q8IWU4 369 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 RBP7Q96R05 134 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 SIGLEC11Q96RL6 698 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 CGREF1Q99674 301 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 CCDC28BQ9BUN5 200 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 POFUT1Q9H488 388 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 MAN2C1Q9NTJ4 1040 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 IL20RAQ9UHF4 553 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 LRCH1Q9Y2L9 728 aa15.37■□□□□ 0.05
UPK3BP1-201ENST00000428678 TRAV40A0A0B4J280 105 aa15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 A0A1W2PPL8 197 aa15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 NPIPB13A6NJU9 1138 aa15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 NPIPB4C9JG80 1138 aa15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 SURF4O15260 269 aa15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 HOXA3O43365 443 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms