RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 PCYT1BQ9Y5K3 369 aaPredicted RBP14.55□□□□□ -0.08
C9orf3-206ENST00000428313 C13orf42A0A1B0GVH6 325 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 DUXAA6NLW8 204 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 CD52P31358 61 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 PTGER1P34995 402 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 OR1G1P47890 313 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 ZNF84P51523 738 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 SKP1P63208 163 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 REEP5Q00765 189 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 MAP2K5Q13163 448 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 TMEM220Q6QAJ8 160 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 HSD11B1LQ7Z5J1 315 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 OR10AD1Q8NGE0 317 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 OR51L1Q8NGJ5 315 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 OR13D1Q8NGV5 346 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 MUCL1Q96DR8 90 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 GPR61Q9BZJ8 451 aa14.55□□□□□ -0.08
C9orf3-206ENST00000428313 FARSAQ9Y285 508 aaKnown RBP14.55□□□□□ -0.08
C9orf3-206ENST00000428313 C1QTNF3-AMACRE9PGA6 284 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 SLC17A2O00624 439 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 DDNO94850 711 aaPredicted RBP14.54□□□□□ -0.08
C9orf3-206ENST00000428313 TSPAN15O95858 294 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 AGR2O95994 175 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 CSTBP04080 98 aaKnown RBP14.54□□□□□ -0.08
C9orf3-206ENST00000428313 SFTPBP07988 381 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 HIST1H1CP16403 213 aaKnown RBP14.54□□□□□ -0.08
C9orf3-206ENST00000428313 ADAM8P78325 824 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 DUSP8Q13202 625 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 TOMM34Q15785 309 aaPredicted RBP14.54□□□□□ -0.08
C9orf3-206ENST00000428313 C17orf64Q86WR6 236 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 AMER3Q8N944 861 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 OR4K13Q8NH42 304 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 CASTOR1Q8WTX7 329 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 THRSPQ92748 146 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 RSPRY1Q96DX4 576 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 SLC35A4Q96G79 324 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 Q96M85 177 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 SMOC1Q9H4F8 434 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 A0A0A6YYH2 397 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 A6NJ64 397 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 EFSO43281 561 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 HIST1H2BKO60814 126 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 ERAL1O75616 437 aaKnown RBP14.54□□□□□ -0.08
C9orf3-206ENST00000428313 UPK3AO75631 287 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 CST4P01036 141 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 F13BP05160 661 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 HIST1H2BJP06899 126 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 SOD3P08294 240 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 ZNF28P17035 718 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 FGF7P21781 194 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 HIST1H2BOP23527 126 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 HIST1H2BBP33778 126 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 PBX2P40425 430 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 HIST1H2BDP58876 126 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 TAS2R31P59538 309 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 HIST1H2BCP62807 126 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 HIST2H2BEQ16778 126 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.54□□□□□ -0.08
C9orf3-206ENST00000428313 PHF19Q5T6S3 580 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 ZNF385CQ66K41 422 aaPredicted RBP14.54□□□□□ -0.08
C9orf3-206ENST00000428313 DCXRQ7Z4W1 244 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 CCDC116Q8IYX3 515 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 OR5K2Q8NHB8 316 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 ADAMTS15Q8TE58 950 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 HIST1H2BHQ93079 126 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 CNRIP1Q96F85 164 aaPredicted RBP14.54□□□□□ -0.08
C9orf3-206ENST00000428313 TNFRSF13CQ96RJ3 184 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 HIST1H2BNQ99877 126 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 HIST1H2BMQ99879 126 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 EPHX3Q9H6B9 360 aa14.54□□□□□ -0.08
C9orf3-206ENST00000428313 CCL15-CCL14A0A0B4J2E2 113 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 GMFGO60234 142 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 HEXBP07686 556 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 POLR2LP62875 67 aaKnown RBP14.53□□□□□ -0.08
C9orf3-206ENST00000428313 NKX6-1P78426 367 aaPredicted RBP14.53□□□□□ -0.08
C9orf3-206ENST00000428313 BEX3Q00994 111 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 DUSP2Q05923 314 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 CCL15Q16663 113 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 C14orf28Q4W4Y0 310 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 LRRC73Q5JTD7 316 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 FAM46CQ5VWP2 391 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 RPL7L1Q6DKI1 246 aaKnown RBP14.53□□□□□ -0.08
C9orf3-206ENST00000428313 OR2L5Q8NG80 312 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 OR2A12Q8NGT7 310 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 GPR148Q8TDV2 347 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 ST7LQ8TDW4 575 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 SUSD6Q92537 303 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 GLYATL1Q969I3 302 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 MRGPRFQ96AM1 343 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 NTNG2Q96CW9 530 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 FRRS1LQ9P0K9 344 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 TMED7Q9Y3B3 224 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 WDR45Q9Y484 360 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 LOC100509620A0A075B734 347 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 A0A087WV48 116 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 CCDC187A0A096LP49 1063 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 A0A1W2PPC1 479 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 PRR32B1ATL7 298 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 GPANK1O95872 356 aa14.53□□□□□ -0.08
C9orf3-206ENST00000428313 GAPDHP04406 335 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms