RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 SLC34A1Q06495 639 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 RCN1Q15293 331 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 OR1Q1Q15612 314 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 OR1C1Q15619 314 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 PLPPR5Q32ZL2 321 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 GLYR1Q49A26 553 aaPredicted RBP4.8□□□□□ -1.64
C9orf3-205ENST00000427193 SLC25A25Q6KCM7 469 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 RPUSD3Q6P087 351 aaKnown RBP4.8□□□□□ -1.64
C9orf3-205ENST00000427193 SHQ1Q6PI26 577 aaKnown RBP4.8□□□□□ -1.64
C9orf3-205ENST00000427193 TBPL2Q6SJ96 375 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 NHLRC1Q6VVB1 395 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 ZNF550Q7Z398 422 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 PLCZ1Q86YW0 608 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 SIAH3Q8IW03 269 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 CHERPQ8IWX8 916 aaKnown RBP4.8□□□□□ -1.64
C9orf3-205ENST00000427193 GTPBP8Q8N3Z3 284 aaPredicted RBP4.8□□□□□ -1.64
C9orf3-205ENST00000427193 TMEM156Q8N614 296 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 OR2M7Q8NG81 312 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 DNAJA4Q8WW22 397 aaPredicted RBP4.8□□□□□ -1.64
C9orf3-205ENST00000427193 ST8SIA1Q92185 356 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 RNF183Q96D59 192 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 SNRNP40Q96DI7 357 aaKnown RBP4.8□□□□□ -1.64
C9orf3-205ENST00000427193 TPD52L3Q96J77 140 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 MPP4Q96JB8 637 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 MCHR1Q99705 422 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 GPA33Q99795 319 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 SLC29A1Q99808 456 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 ZNF559Q9BR84 538 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 UTP23Q9BRU9 249 aaKnown RBP4.8□□□□□ -1.64
C9orf3-205ENST00000427193 TMEM43Q9BTV4 400 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 OSBPL10Q9BXB5 764 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 HES7Q9BYE0 225 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 TBL1XR1Q9BZK7 514 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 SLC19A3Q9BZV2 496 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 OR2B2Q9GZK3 357 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 ARMC7Q9H6L4 198 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 YY1AP1Q9H869 796 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 ZDHHC11Q9H8X9 412 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 MEPEQ9NQ76 525 aaPredicted RBP4.8□□□□□ -1.64
C9orf3-205ENST00000427193 MED17Q9NVC6 651 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 HPF1Q9NWY4 346 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 QPCTLQ9NXS2 382 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 KLHL28Q9NXS3 571 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 USE1Q9NZ43 259 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 LUZP4Q9P127 313 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 OSGIN1Q9UJX0 560 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 FBXL2Q9UKC9 423 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 AURKCQ9UQB9 309 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 CARD8Q9Y2G2 431 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 C15orf41Q9Y2V0 281 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 ZNF407Q9C0G0 2248 aa4.8□□□□□ -1.64
C9orf3-205ENST00000427193 DNAJC13O75165 2243 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 A0A087WZY1 265 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 TRAV17A0A0B4J275 112 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 A0A1B0GVC2 190 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 TRAPPC13A5PLN9 417 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 HTR3EA5X5Y0 456 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 FAM172BPA6NC97 362 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 H0YJX3 145 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 H3BNH8 94 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 ADAMDEC1O15204 470 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 LRRTM2O43300 516 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 ZNF208O43345 1280 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 CDC40O60508 579 aaKnown RBP eCLIP4.79□□□□□ -1.64
C9orf3-205ENST00000427193 CBR3O75828 277 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 CST1P01037 141 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 IGHG3P01860 377 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 ZNF17P17021 662 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 SRD5A2P31213 254 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 RRM2P31350 389 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 KRT20P35900 424 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 RBM34P42696 430 aaKnown RBP4.79□□□□□ -1.64
C9orf3-205ENST00000427193 OMPP47874 163 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 RFX3P48380 749 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 GSSP48637 474 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 DNASE1L1P49184 302 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 CRIP2P52943 208 aaPredicted RBP4.79□□□□□ -1.64
C9orf3-205ENST00000427193 DSCR4P56555 118 aaPredicted RBP4.79□□□□□ -1.64
C9orf3-205ENST00000427193 CLDN15P56746 228 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 FXYD6P3P58550 94 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 RPS4XP62701 263 aaKnown RBP4.79□□□□□ -1.64
C9orf3-205ENST00000427193 RPP38P78345 283 aaKnown RBP4.79□□□□□ -1.64
C9orf3-205ENST00000427193 ST3GAL3Q11203 375 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 GANABQ14697 944 aaKnown RBP4.79□□□□□ -1.64
C9orf3-205ENST00000427193 ZNF239Q16600 458 aaKnown RBP4.79□□□□□ -1.64
C9orf3-205ENST00000427193 NHSL2Q5HYW2 709 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 LCE1FQ5T754 118 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 PRAMEF20Q5VT98 475 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 KDM4DQ6B0I6 523 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 C1orf94Q6P1W5 598 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 ULK3Q6PHR2 472 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 ARSKQ6UWY0 536 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 LINC00696Q6ZRV3 163 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 FOXL2NBQ6ZUU3 175 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 PLEKHM3Q6ZWE6 761 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 TMPRSS11FQ6ZWK6 438 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 GRINAQ7Z429 371 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 ZER1Q7Z7L7 766 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 CYP4Z1Q86W10 505 aa4.79□□□□□ -1.64
C9orf3-205ENST00000427193 NKAIN4Q8IVV8 208 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms