RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 PGCP20142 388 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 ABCD3P28288 659 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 KIR3DL2P43630 455 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 RAG2P55895 527 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 TCF15Q12870 199 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 CAMK2DQ13557 499 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 LINC00303Q3SY05 128 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 YOD1Q5VVQ6 348 aaPredicted RBP9.6□□□□□ -0.87
CUX1-205ENST00000425244 ZNF782Q6ZMW2 699 aaPredicted RBP9.6□□□□□ -0.87
CUX1-205ENST00000425244 SLC29A4Q7RTT9 530 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 AGBL5Q8NDL9 886 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 OR51D1Q8NGF3 324 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 ZNF417Q8TAU3 575 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 THAP3Q8WTV1 239 aaPredicted RBP9.6□□□□□ -0.87
CUX1-205ENST00000425244 DAZLQ92904 295 aaKnown RBP9.6□□□□□ -0.87
CUX1-205ENST00000425244 C4orf45Q96LM5 186 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 GPR137Q96N19 417 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 MRPL39Q9NYK5 338 aaKnown RBP9.6□□□□□ -0.87
CUX1-205ENST00000425244 NUP50Q9UKX7 468 aa9.6□□□□□ -0.87
CUX1-205ENST00000425244 TMED7-TICAM2A0A0A6YYA0 188 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 A0A1B0GVI7 797 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 PMS2P1A4D2B8 440 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 NTN3O00634 580 aaPredicted RBP9.59□□□□□ -0.87
CUX1-205ENST00000425244 NDUFA2O43678 99 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 HOXB1P14653 301 aaPredicted RBP9.59□□□□□ -0.87
CUX1-205ENST00000425244 BTF3P20290 206 aaKnown RBP9.59□□□□□ -0.87
CUX1-205ENST00000425244 EFNB2P52799 333 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 BLVRAP53004 296 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 ADAM8P78325 824 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 EGR3Q06889 387 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 RASGEF1BQ0VAM2 473 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 SQSTM1Q13501 440 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 CBFBQ13951 182 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 OR7E24Q6IFN5 339 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 NLRC3Q7RTR2 1065 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 MDGA2Q7Z553 956 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 KRT77Q7Z794 578 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 ZNF680Q8NEM1 530 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 OTOSQ8NHW6 89 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 PARD6AQ9NPB6 346 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 MGAT4CQ9UBM8 478 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 B9D1Q9UPM9 204 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 TMED7Q9Y3B3 224 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 TCRBV16S1A1N1A0A5B0 115 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 PRSS37A4D1T9 235 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 MEN1O00255 615 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 RAF1P04049 648 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 ALDOBP05062 364 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 CTLA4P16410 223 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 ATF4P18848 351 aaPredicted RBP9.59□□□□□ -0.87
CUX1-205ENST00000425244 ACP1P24666 158 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 PCGF3Q3KNV8 242 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 NKAIN1Q4KMZ8 207 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 LCN10Q6JVE6 187 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 RHBDD2Q6NTF9 364 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 TEX261Q6UWH6 196 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 DHRS13Q6UX07 377 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 FTMTQ8N4E7 242 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 MEIOBQ8N635 442 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 PRSS33Q8NF86 280 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 LHFPL5Q8TAF8 219 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 STT3BQ8TCJ2 826 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 DUSP19Q8WTR2 217 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 MVB12AQ96EY5 273 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 DCBLD2Q96PD2 775 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 VN1R1Q9GZP7 353 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 SLC22A11Q9NSA0 550 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 STEAP1Q9UHE8 339 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 SCP2D1Q9UJQ7 156 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 SRPK3Q9UPE1 567 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 ETV7Q9Y603 341 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 U3KQ87 197 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 PCNX3Q9H6A9 2034 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 AHCTF1Q8WYP5 2266 aa9.59□□□□□ -0.87
CUX1-205ENST00000425244 ANKRD20A5PA0PJZ0 165 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 NAP1L6A6NFF2 107 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 ALG1L2C9J202 215 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 SULT1B1O43704 296 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 SLC22A5O76082 557 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 ZNF432O94892 652 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 TPOP07202 933 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 ZNF883P0CG24 379 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 LCN1P31025 176 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 RPL27P61353 136 aaKnown RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 GUCA2AQ02747 115 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 LGALSLQ3ZCW2 172 aaPredicted RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 C1orf140Q5VVS0 124 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 METTL11BQ5VVY1 283 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 DBX2Q6ZNG2 339 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 PLPP7Q8NBV4 271 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 UXS1Q8NBZ7 420 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 NXPE2Q96DL1 559 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 ZNF587Q96SQ5 575 aaPredicted RBP9.58□□□□□ -0.88
CUX1-205ENST00000425244 LRFN3Q9BTN0 628 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 MRI1Q9BV20 369 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 PTDSS2Q9BVG9 487 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 IFT22Q9H7X7 185 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 TRAV18A0A075B6X5 111 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 TRBV5-7A0A0A0MS05 114 aa9.58□□□□□ -0.88
CUX1-205ENST00000425244 BET1O15155 118 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms