RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 FBXO6Q9NRD1 293 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 TMEM30AQ9NV96 361 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 IL17CQ9P0M4 197 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 MUTYHQ9UIF7 546 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 PSG11Q9UQ72 335 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 ASF1AQ9Y294 204 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 ACOT9Q9Y305 439 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 SNX24Q9Y343 169 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 OR2W1Q9Y3N9 320 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 RPL36Q9Y3U8 105 aaKnown RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 KIAA0232Q92628 1395 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 MYH14Q7Z406 1995 aaKnown RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 A0A0G2JK05 382 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 TRBV4-1A0A0J9YWV2 114 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 A0A1B0GV72 72 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 A6NIZ1 184 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 SNURFLB1AK76 121 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 K7ERI5 159 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 DFFAO00273 331 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 CCRL2O00421 344 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 CCL21O00585 134 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 SLC9A3R1O14745 358 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 SIGLEC5O15389 551 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 CRXO43186 299 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 PRKYO43930 277 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 STX10O60499 249 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 SHOX2O60902 331 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 SMIM24O75264 130 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 LYPD3O95274 346 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 MPZL1O95297 269 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 CTDNEP1O95476 244 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 CLIC3O95833 236 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 HPP00738 406 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 GCGP01275 180 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 RLN2P04090 185 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 IFNA16P05015 189 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 BCHEP06276 602 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 ACSM4P0C7M7 580 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 IGHV4-30-4P0DP06 118 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 CSNK2A2P19784 350 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 TBPP20226 339 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 SERPINA2P20848 420 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 C4BPBP20851 252 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 FUT3P21217 361 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 GNRHRP30968 328 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 NTSP30990 170 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 SSTR5P35346 364 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 PRKXP51817 358 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 HNRNPA3P51991 378 aaKnown RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 GAS1P54826 345 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 LINC00205P59089 165 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 RAB8AP61006 207 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 RND3P61587 244 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 STXBP1P61764 594 aaKnown RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 FAM3AP98173 230 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 ST3GAL4Q11206 333 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 DYNC1I2Q13409 638 aaKnown RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 UNC119Q13432 240 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 KRR1Q13601 381 aaKnown RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 GPR18Q14330 331 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 POU6F1Q14863 301 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 CD226Q15762 336 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 NDUFA5Q16718 116 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 VWA2Q5GFL6 755 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 TEX30Q5JUR7 227 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 DCAF10Q5QP82 559 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 HES5Q5TA89 166 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 OTUD1Q5VV17 481 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 MEDAGQ5VYS4 303 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 TRIQKQ629K1 86 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 RUSC1-AS1Q66K80 236 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 OR52E8Q6IFG1 317 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 PWWP2BQ6NUJ5 590 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF544Q6NX49 715 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 CD200R1LQ6Q8B3 271 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 RBMS3Q6XE24 437 aaKnown RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 STAC2Q6ZMT1 411 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 Q6ZSV7 163 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 MBOAT2Q6ZWT7 520 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 GDPD3Q7L5L3 318 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 PIP4P1Q86T03 277 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 LHFPL3Q86UP9 236 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 APLFQ8IW19 511 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 OR4N5Q8IXE1 308 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 FAM71AQ8IYT1 594 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 LGI3Q8N145 548 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 CA13Q8N1Q1 262 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 STK40Q8N2I9 435 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 PGBD5Q8N414 524 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 MREGQ8N565 214 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 KLHDC9Q8NEP7 349 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 OR51D1Q8NGF3 324 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 OR1K1Q8NGR3 316 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 OR5B3Q8NH48 314 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF502Q8TBZ5 544 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 SFXN5Q8TD22 340 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 TBCKQ8TEA7 893 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 CASTOR1Q8WTX7 329 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 ANKRD9Q96BM1 317 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms