RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 C11orf65Q8NCR3 313 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 POP5Q969H6 163 aaKnown RBP10.82□□□□□ -0.68
LINC00339-203ENST00000420503 THOC1Q96FV9 657 aaKnown RBP10.82□□□□□ -0.68
LINC00339-203ENST00000420503 C7orf26Q96N11 449 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 LRMDAQ9H2I8 198 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 NANOGQ9H9S0 305 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 SIAEQ9HAT2 523 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 PATZ1Q9HBE1 687 aaKnown RBP10.82□□□□□ -0.68
LINC00339-203ENST00000420503 INIPQ9NRY2 104 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 TNFRSF19Q9NS68 423 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 TMEM106BQ9NUM4 274 aa10.82□□□□□ -0.68
LINC00339-203ENST00000420503 A0A1W2PRG6 482 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 F5H0A9 414 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-203ENST00000420503 H7C1C5 153 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 DYNC1I1O14576 645 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 TIMM8AO60220 97 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-203ENST00000420503 PTHP01270 115 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 MT-ND5P03915 603 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 HIST1H2ABP04908 130 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 CD55P08174 381 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 ADH4P08319 380 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 PPIBP23284 216 aaKnown RBP10.81□□□□□ -0.68
LINC00339-203ENST00000420503 PCGF2P35227 344 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 LCN6P62502 163 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 CD47Q08722 323 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 ENDOGQ14249 297 aaKnown RBP10.81□□□□□ -0.68
LINC00339-203ENST00000420503 NRN1LQ496H8 165 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 HIST3H2AQ7L7L0 130 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 DPPA2Q7Z7J5 298 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 DHDDSQ86SQ9 333 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 MICU2Q8IYU8 434 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 OR2Z1Q8NG97 314 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 LRRC8CQ8TDW0 803 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 ITLN1Q8WWA0 313 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 SLC7A6Q92536 515 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 HIST1H2ACQ93077 130 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 MAGEB18Q96M61 343 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 EMC7Q9NPA0 242 aa10.81□□□□□ -0.68
LINC00339-203ENST00000420503 PDP1Q9P0J1 537 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-203ENST00000420503 PPIAL4EA0A075B759 164 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 TRAV40A0A0B4J280 105 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 PPIAL4CA0A0B4J2A2 164 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 CEACAM18A8MTB9 384 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 EVPLLA8MZ36 301 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 PPIAL4DF5H284 164 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 MT-ND1P03886 318 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 PPIAL4FP0DN26 164 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 SELEP16581 610 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 GZMMP51124 257 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 PRSS12P56730 875 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 KRTAP10-3P60369 221 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 BTG1P62324 171 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 PAX2Q02962 417 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 CDK5R2Q13319 367 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 PIN1Q13526 163 aaPredicted RBP10.8□□□□□ -0.68
LINC00339-203ENST00000420503 TAF11Q15544 211 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 HSP90B2PQ58FF3 399 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 MTX3Q5HYI7 312 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 FAM201AQ5SY85 155 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 SPATC1Q76KD6 591 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 PARP8Q8N3A8 854 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 ZNF283Q8N7M2 679 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 OR10A6Q8NH74 314 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 ZNF420Q8TAQ5 688 aaPredicted RBP10.8□□□□□ -0.68
LINC00339-203ENST00000420503 DYDC1Q8WWB3 177 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 SGTBQ96EQ0 304 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 CGREF1Q99674 301 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 EGLN1Q9GZT9 426 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 PCDHAC1Q9H158 963 aa10.8□□□□□ -0.68
LINC00339-203ENST00000420503 EIF3KQ9UBQ5 218 aaKnown RBP10.8□□□□□ -0.68
LINC00339-203ENST00000420503 POLR3KQ9Y2Y1 108 aaPredicted RBP10.8□□□□□ -0.68
LINC00339-203ENST00000420503 A0A1W2PPL8 197 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 A8MXK9 166 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 ENTPD5O75356 428 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 TSPAN19P0C672 248 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 OR1E2P47887 323 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 DAP3P51398 398 aaKnown RBP10.79□□□□□ -0.68
LINC00339-203ENST00000420503 MMP16P51512 607 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 RELBQ01201 579 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 PAX8Q06710 450 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 DBPQ10586 325 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-203ENST00000420503 MOGQ16653 247 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 FAM27BQ5VT28 67 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 BRD3OSQ6XYD6 125 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 LRRC28Q86X40 367 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-203ENST00000420503 OR5AS1Q8N127 324 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 KIR3DL3Q8N743 410 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 TMIGD2Q96BF3 282 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 MPP4Q96JB8 637 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 C4orf45Q96LM5 186 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 SLC19A3Q9BZV2 496 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 MS4A7Q9GZW8 240 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-203ENST00000420503 KAT8Q9H7Z6 458 aaKnown RBP10.79□□□□□ -0.68
LINC00339-203ENST00000420503 SH3GLB1Q9Y371 365 aa10.79□□□□□ -0.68
LINC00339-203ENST00000420503 H0YL77 283 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 IMPA2O14732 288 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 HOXA3O43365 443 aaPredicted RBP10.78□□□□□ -0.68
LINC00339-203ENST00000420503 CYB5R3P00387 301 aaPredicted RBP10.78□□□□□ -0.68
LINC00339-203ENST00000420503 IL13RA1P78552 427 aa10.78□□□□□ -0.68
LINC00339-203ENST00000420503 SLC3A1Q07837 685 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms