RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 SIRPAP78324 504 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 SPEM2Q0P670 501 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 CBFBQ13951 182 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 CT45A2Q5DJT8 189 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 SLC29A4Q7RTT9 530 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 ZNF546Q86UE3 836 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 LDLRAD3Q86YD5 345 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 PUSL1Q8N0Z8 303 aaKnown RBP13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 BCORP1Q8N888 145 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 PLPP5Q8NEB5 264 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 OR5M1Q8NGP8 315 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 ZNF721Q8TF20 911 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 HOXB13Q92826 284 aaPredicted RBP13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 SLC25A38Q96DW6 304 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 CMKLR1Q99788 373 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 NUDT9Q9BW91 350 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 SEC11CQ9BY50 192 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 TGIF2Q9GZN2 237 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 SLITRK2Q9H156 845 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 RNF122Q9H9V4 155 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 TMEM138Q9NPI0 162 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 TMEM9BQ9NQ34 198 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 RXFP3Q9NSD7 469 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 MTFP1Q9UDX5 166 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 ZNF629Q9UEG4 869 aaPredicted RBP13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 NTNG1Q9Y2I2 539 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 V9GY05 133 aa13.35□□□□□ -0.27
SEMA4D-204ENST00000420101 IGHV3-20A0A0C4DH32 117 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 SYNDIG1LA6NDD5 238 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 DDAH2O95865 285 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 IFNGP01579 166 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 CLPSP04118 112 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 ZNF806P0C7X5 589 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 RPS4Y1P22090 263 aaKnown RBP13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 EFNA3P52797 238 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 HCCSP53701 268 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 EMP2P54851 167 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 OR12D2P58182 307 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 SNTB1Q13884 538 aaKnown RBP13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 ESPNLQ6ZVH7 1005 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 TMPRSS11FQ6ZWK6 438 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 NKAIN4Q8IVV8 208 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 OR1J4Q8NGS1 313 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 RPS4Y2Q8TD47 263 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 TBX5Q99593 518 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 ULBP3Q9BZM4 244 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 OR51M1Q9H341 326 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 KCNE5Q9UJ90 142 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 AK6Q9Y3D8 172 aaKnown RBP13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 FAM183AA6NL82 134 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 WRBO00258 174 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 CDX4O14627 284 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 FGF16O43320 207 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 SSX5O60225 188 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 ALOX12BO75342 701 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 VSIG10L2P0DP72 767 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 CD59P13987 128 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 NOS3P29474 1203 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 PPICP45877 212 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 PPIAP62937 165 aaKnown RBP13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 GGTLC2Q14390 218 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 GLT8D1Q68CQ7 371 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 OR7E24Q6IFN5 339 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 C11orf88Q6PI97 169 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 SERPINA12Q8IW75 414 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 THAP6Q8TBB0 222 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 SYNPRQ8TBG9 265 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 MR1Q95460 341 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 CRB3Q9BUF7 120 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 STRADBQ9C0K7 418 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 MRPL15Q9P015 296 aaKnown RBP13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 KLK11Q9UBX7 282 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 ADAMTS20P59510 1910 aa13.34□□□□□ -0.27
SEMA4D-204ENST00000420101 IGLV3-12A0A075B6K2 115 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 FMO6PO60774 539 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 GLSO94925 669 aaPredicted RBP13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 AKAIN1P0CW23 69 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 RPS11P62280 158 aaKnown RBP eCLIP13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 SORDQ00796 357 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 RNF212Q495C1 297 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 CDNFQ49AH0 187 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 NKAPLQ5M9Q1 402 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 JMJD6Q6NYC1 403 aaPredicted RBP13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 ZNF613Q6PF04 617 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 ZNF813Q6ZN06 617 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 ACOT7LQ6ZUV0 252 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 ANKRD37Q7Z713 158 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 PRR22Q8IZ63 422 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 OR5J2Q8NH18 312 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 ARL11Q969Q4 196 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 SLC25A21Q9BQT8 299 aaPredicted RBP13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 FAM117AQ9C073 453 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 NRSN2Q9GZP1 204 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 NXF5Q9H1B4 397 aaKnown RBP13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 COMMD9Q9P000 198 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 ZNF223Q9UK11 482 aaPredicted RBP13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 SLC7A7Q9UM01 511 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 TNFSF18Q9UNG2 199 aa13.33□□□□□ -0.28
SEMA4D-204ENST00000420101 CDC14CA4D256 554 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms