RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 SLC27A4Q6P1M0 643 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 ZDHHC13Q8IUH4 622 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 DEPDC4Q8N2C3 294 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 CYB561A3Q8NBI2 242 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 CPEB3Q8NE35 698 aaKnown RBP16.13■□□□□ 0.17
PTCD3-204ENST00000418628 SMAP2Q8WU79 429 aaPredicted RBP16.13■□□□□ 0.17
PTCD3-204ENST00000418628 PIGTQ969N2 578 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 FOXN4Q96NZ1 517 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 PKP2Q99959 881 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 OR2H1Q9GZK4 316 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 WNT5BQ9H1J7 359 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 SEMA6AQ9H2E6 1030 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 ZNF442Q9H7R0 627 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 PAPOLBQ9NRJ5 636 aaKnown RBP16.13■□□□□ 0.17
PTCD3-204ENST00000418628 OAZ3Q9UMX2 235 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 HIVEP1P15822 2718 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 YLPM1P49750 1951 aaKnown RBP16.13■□□□□ 0.17
PTCD3-204ENST00000418628 ICMTO60725 284 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 MPZL1O95297 269 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 GPANK1O95872 356 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 TFP02787 698 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 NR4A1P22736 598 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 HIST1H3AP68431 136 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 GLO1Q04760 184 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 AQP6Q13520 282 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 ZSCAN26Q16670 478 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 HIST2H3PS2Q5TEC6 136 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 HIST2H3AQ71DI3 136 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 PAQR4Q8N4S7 273 aaPredicted RBP16.12■□□□□ 0.17
PTCD3-204ENST00000418628 SLC30A7Q8NEW0 376 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 ZNRF4Q8WWF5 429 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 C11orf40Q8WZ69 217 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 KCNS3Q9BQ31 491 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 S100A14Q9HCY8 104 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 CCNB1IP1Q9NPC3 277 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 CA10Q9NS85 328 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 ZNF701Q9NV72 531 aaPredicted RBP16.12■□□□□ 0.17
PTCD3-204ENST00000418628 MRPL22Q9NWU5 206 aaKnown RBP16.12■□□□□ 0.17
PTCD3-204ENST00000418628 KIF17Q9P2E2 1029 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 LHFPL6Q9Y693 200 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 TANC2Q9HCD6 1990 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 CR1P17927 2039 aa16.12■□□□□ 0.17
PTCD3-204ENST00000418628 C12orf71A8MTZ7 269 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 CRISP1P54107 249 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 PCBD1P61457 104 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 HSF2Q03933 536 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 GINS1Q14691 196 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 LINC01590Q5TEZ4 76 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 KRTAP1-3Q8IUG1 177 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 C10orf67Q8IYJ2 551 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 LRRC75A-AS1Q8N1F1 130 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 POM121L2Q96KW2 1035 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 OSBPL10Q9BXB5 764 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 GSX2Q9BZM3 304 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 KCNN2Q9H2S1 579 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 RNF121Q9H920 327 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 SRA1Q9HD15 236 aaKnown RBP16.11■□□□□ 0.17
PTCD3-204ENST00000418628 FAIMQ9NVQ4 179 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 POU2F3Q9UKI9 436 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 LAMP3Q9UQV4 416 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 TIMM10BQ9Y5J6 103 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 ATP23Q9Y6H3 246 aa16.11■□□□□ 0.17
PTCD3-204ENST00000418628 ACANP16112 2415 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 LOC100509620A0A075B734 347 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 SURF4O15260 269 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 MITFO75030 526 aaPredicted RBP16.1■□□□□ 0.17
PTCD3-204ENST00000418628 PTHP01270 115 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 IFNGP01579 166 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 COX5BP10606 129 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 ZNF3P17036 446 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 SPI1P17947 270 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 APEX1P27695 318 aaKnown RBP16.1■□□□□ 0.17
PTCD3-204ENST00000418628 APOBEC3AP31941 199 aaPredicted RBP16.1■□□□□ 0.17
PTCD3-204ENST00000418628 GUCA1AP43080 201 aaPredicted RBP16.1■□□□□ 0.17
PTCD3-204ENST00000418628 ESRRGP62508 458 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 SCRN3Q0VDG4 424 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 SNTB2Q13425 540 aaKnown RBP16.1■□□□□ 0.17
PTCD3-204ENST00000418628 ADIPOQQ15848 244 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 MEP1BQ16820 701 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 MSMPQ1L6U9 139 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 SWI5Q1ZZU3 235 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 MST1LQ2TV78 715 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 OTPQ5XKR4 325 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 MUC15Q8N387 334 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 OR2T4Q8NH00 348 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 TMEM171Q8WVE6 324 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 HCAR1Q9BXC0 346 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 GABARAPL3Q9BY60 117 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 RERGLQ9H628 205 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 KRT84Q9NSB2 600 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 CBLN4Q9NTU7 201 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 ATPIF1Q9UII2 106 aa16.1■□□□□ 0.17
PTCD3-204ENST00000418628 IQCMA0A1B0GVH7 501 aa16.09■□□□□ 0.17
PTCD3-204ENST00000418628 RIIAD1A6NNX1 92 aa16.09■□□□□ 0.17
PTCD3-204ENST00000418628 SYNGR3O43761 229 aa16.09■□□□□ 0.17
PTCD3-204ENST00000418628 PCSK6P29122 969 aa16.09■□□□□ 0.17
PTCD3-204ENST00000418628 EPHA2P29317 976 aa16.09■□□□□ 0.17
PTCD3-204ENST00000418628 GGT2P36268 569 aa16.09■□□□□ 0.17
PTCD3-204ENST00000418628 PLP2Q04941 152 aa16.09■□□□□ 0.17
PTCD3-204ENST00000418628 DAG1Q14118 895 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms