RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ZNF362Q5T0B9 420 aaPredicted RBP8.44□□□□□ -1.06
MDC1-202ENST00000416571 WDR93Q6P2C0 686 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 BRICD5Q6PL45 260 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 BLOC1S3Q6QNY0 202 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 LRRC28Q86X40 367 aaPredicted RBP8.44□□□□□ -1.06
MDC1-202ENST00000416571 ZNF283Q8N7M2 679 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 OR2Z1Q8NG97 314 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 OR4F5Q8NH21 305 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 TAF15Q92804 592 aaKnown RBP eCLIP8.44□□□□□ -1.06
MDC1-202ENST00000416571 ZDHHC16Q969W1 377 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 THOC1Q96FV9 657 aaKnown RBP8.44□□□□□ -1.06
MDC1-202ENST00000416571 C4orf45Q96LM5 186 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 SAMD8Q96LT4 415 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 OR2H1Q9GZK4 316 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 IKZF5Q9H5V7 419 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 NKIRAS1Q9NYS0 192 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 IL20RAQ9UHF4 553 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 KLHL21Q9UJP4 597 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 NDRG4Q9ULP0 352 aaKnown RBP8.44□□□□□ -1.06
MDC1-202ENST00000416571 PPP1R3CQ9UQK1 317 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 MMP24Q9Y5R2 645 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 GMEB1Q9Y692 573 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 USH1CQ9Y6N9 552 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 TRRAPQ9Y4A5 3859 aa8.44□□□□□ -1.06
MDC1-202ENST00000416571 TRBV5-3A0A0A0MS03 114 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 M0QZ24 198 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 HOXA3O43365 443 aaPredicted RBP8.43□□□□□ -1.06
MDC1-202ENST00000416571 ABHD16AO95870 558 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 MT-ND1P03886 318 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 THY1P04216 161 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 PPIAL4GP0DN37 164 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 IGHV4-38-2P0DP08 117 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 RPS2P15880 293 aaKnown RBP8.43□□□□□ -1.06
MDC1-202ENST00000416571 FUT1P19526 365 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 LAP3P28838 519 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 AQP2P41181 271 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 MRPL19P49406 292 aaKnown RBP8.43□□□□□ -1.06
MDC1-202ENST00000416571 ZNF133P52736 654 aaPredicted RBP8.43□□□□□ -1.06
MDC1-202ENST00000416571 PCBP3P57721 371 aaKnown RBP8.43□□□□□ -1.06
MDC1-202ENST00000416571 GNB2P62879 340 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 PAX8Q06710 450 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 PSG7Q13046 419 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 HNRNPA0Q13151 305 aaKnown RBP8.43□□□□□ -1.06
MDC1-202ENST00000416571 CDK5R2Q13319 367 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 OCLNQ16625 522 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 TNFAIP8L3Q5GJ75 292 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 FAM27BQ5VT28 67 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 LRRN1Q6UXK5 716 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 C9orf139Q6ZV77 190 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 PATL1Q86TB9 770 aaKnown RBP8.43□□□□□ -1.06
MDC1-202ENST00000416571 JAZF1Q86VZ6 243 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 RBM45Q8IUH3 476 aaKnown RBP8.43□□□□□ -1.06
MDC1-202ENST00000416571 FUNDC1Q8IVP5 155 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 KIR3DL3Q8N743 410 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 NPEPL1Q8NDH3 523 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 GPR32P1Q8NGA4 272 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 UBE2FQ969M7 185 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 NABP1Q96AH0 204 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 SGTBQ96EQ0 304 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 RBP7Q96R05 134 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 SEPHS2Q99611 448 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 ZNF426Q9BUY5 554 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 SSBP3Q9BWW4 388 aaPredicted RBP8.43□□□□□ -1.06
MDC1-202ENST00000416571 WNT5BQ9H1J7 359 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 MAN2C1Q9NTJ4 1040 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 IL19Q9UHD0 177 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 UGT2A1Q9Y4X1 527 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 TIMM10BQ9Y5J6 103 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 WNK1Q9H4A3 2382 aa8.43□□□□□ -1.06
MDC1-202ENST00000416571 MDFIC2A0A1B0GVS7 189 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 A0A1W2PPL8 197 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 FAM181BA6NEQ2 426 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 CEACAM18A8MTB9 384 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 F5H0A9 414 aaPredicted RBP8.42□□□□□ -1.06
MDC1-202ENST00000416571 TIMM23O14925 209 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 ICMTO60725 284 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 OR7A10O76100 309 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 LYPD3O95274 346 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 CST2P09228 141 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 CPT2P23786 658 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 CD80P33681 288 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 RAG2P55895 527 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 TAS2R41P59536 307 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 TOP3AQ13472 1001 aaPredicted RBP8.42□□□□□ -1.06
MDC1-202ENST00000416571 AGKQ53H12 422 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 TTMPQ5BVD1 217 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 ARMC4Q5T2S8 1044 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 ZNF774Q6NX45 483 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 EPGNQ6UW88 154 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 SLC30A8Q8IWU4 369 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 FNDC8Q8TC99 324 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 ITLN1Q8WWA0 313 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 RASSF5Q8WWW0 418 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 WFDC12Q8WWY7 111 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 HDAC2Q92769 488 aaKnown RBP8.42□□□□□ -1.06
MDC1-202ENST00000416571 UPRTQ96BW1 309 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 PLEKHA8Q96JA3 519 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 MAGEB18Q96M61 343 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 CPPED1Q9BRF8 314 aaPredicted RBP8.42□□□□□ -1.06
MDC1-202ENST00000416571 MMP27Q9H306 513 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms