RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 LRRC46Q96FV0 321 aa8.82□□□□□ -1
CD44-206ENST00000415148 LMF1Q96S06 567 aa8.82□□□□□ -1
CD44-206ENST00000415148 ADAT1Q9BUB4 502 aaKnown RBP8.82□□□□□ -1
CD44-206ENST00000415148 PTDSS2Q9BVG9 487 aa8.82□□□□□ -1
CD44-206ENST00000415148 MFFQ9GZY8 342 aa8.82□□□□□ -1
CD44-206ENST00000415148 UCK1Q9HA47 277 aa8.82□□□□□ -1
CD44-206ENST00000415148 CERS4Q9HA82 394 aa8.82□□□□□ -1
CD44-206ENST00000415148 GPR27Q9NS67 375 aa8.82□□□□□ -1
CD44-206ENST00000415148 VSX1Q9NZR4 365 aaPredicted RBP8.82□□□□□ -1
CD44-206ENST00000415148 MYEF2Q9P2K5 600 aaKnown RBP8.82□□□□□ -1
CD44-206ENST00000415148 KCNG2Q9UJ96 466 aa8.82□□□□□ -1
CD44-206ENST00000415148 DHDHQ9UQ10 334 aa8.82□□□□□ -1
CD44-206ENST00000415148 MMACHCQ9Y4U1 282 aa8.82□□□□□ -1
CD44-206ENST00000415148 TMEM131Q92545 1883 aa8.82□□□□□ -1
CD44-206ENST00000415148 PRSS37A4D1T9 235 aa8.81□□□□□ -1
CD44-206ENST00000415148 FITM1A5D6W6 292 aa8.81□□□□□ -1
CD44-206ENST00000415148 CCSO14618 274 aa8.81□□□□□ -1
CD44-206ENST00000415148 NUDT21O43809 227 aaKnown RBP8.81□□□□□ -1
CD44-206ENST00000415148 OR6A2O95222 327 aa8.81□□□□□ -1
CD44-206ENST00000415148 WDPCPO95876 746 aa8.81□□□□□ -1
CD44-206ENST00000415148 IGHMP01871 453 aa8.81□□□□□ -1
CD44-206ENST00000415148 CELA2BP08218 269 aaPredicted RBP8.81□□□□□ -1
CD44-206ENST00000415148 OR4E1P0C645 316 aa8.81□□□□□ -1
CD44-206ENST00000415148 UBBP0CG47 229 aa8.81□□□□□ -1
CD44-206ENST00000415148 UBCP0CG48 685 aaKnown RBP8.81□□□□□ -1
CD44-206ENST00000415148 HTR2CP28335 458 aa8.81□□□□□ -1
CD44-206ENST00000415148 GABRA4P48169 554 aa8.81□□□□□ -1
CD44-206ENST00000415148 RPS27AP62979 156 aaKnown RBP8.81□□□□□ -1
CD44-206ENST00000415148 UBA52P62987 128 aaKnown RBP8.81□□□□□ -1
CD44-206ENST00000415148 FZD2Q14332 565 aa8.81□□□□□ -1
CD44-206ENST00000415148 NR0B2Q15466 257 aa8.81□□□□□ -1
CD44-206ENST00000415148 SGCBQ16585 318 aa8.81□□□□□ -1
CD44-206ENST00000415148 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.81□□□□□ -1
CD44-206ENST00000415148 TMEM225Q6GV28 225 aa8.81□□□□□ -1
CD44-206ENST00000415148 ELP2Q6IA86 826 aa8.81□□□□□ -1
CD44-206ENST00000415148 C11orf88Q6PI97 169 aa8.81□□□□□ -1
CD44-206ENST00000415148 CATSPERDQ86XM0 798 aa8.81□□□□□ -1
CD44-206ENST00000415148 LINC00518Q8N0U6 118 aa8.81□□□□□ -1
CD44-206ENST00000415148 BPIFCQ8NFQ6 507 aa8.81□□□□□ -1
CD44-206ENST00000415148 OR1J4Q8NGS1 313 aa8.81□□□□□ -1
CD44-206ENST00000415148 ZNF519Q8TB69 540 aa8.81□□□□□ -1
CD44-206ENST00000415148 ASB5Q8WWX0 329 aa8.81□□□□□ -1
CD44-206ENST00000415148 METTL21AQ8WXB1 218 aa8.81□□□□□ -1
CD44-206ENST00000415148 C8orf44Q96CB5 159 aa8.81□□□□□ -1
CD44-206ENST00000415148 ELF4Q99607 663 aaPredicted RBP8.81□□□□□ -1
CD44-206ENST00000415148 EDEM2Q9BV94 578 aa8.81□□□□□ -1
CD44-206ENST00000415148 TMEM106CQ9BVX2 250 aa8.81□□□□□ -1
CD44-206ENST00000415148 CHRNA10Q9GZZ6 450 aa8.81□□□□□ -1
CD44-206ENST00000415148 NXF5Q9H1B4 397 aaKnown RBP8.81□□□□□ -1
CD44-206ENST00000415148 POFUT1Q9H488 388 aa8.81□□□□□ -1
CD44-206ENST00000415148 SAV1Q9H4B6 383 aaPredicted RBP8.81□□□□□ -1
CD44-206ENST00000415148 LAMA1P25391 3075 aa8.81□□□□□ -1
CD44-206ENST00000415148 A0A1W2PPC1 479 aa8.81□□□□□ -1
CD44-206ENST00000415148 TMEM82A0PJX8 343 aa8.81□□□□□ -1
CD44-206ENST00000415148 TMEM200CA6NKL6 621 aa8.81□□□□□ -1
CD44-206ENST00000415148 C17orf51A8MQB3 221 aa8.81□□□□□ -1
CD44-206ENST00000415148 M0QYG6 137 aa8.81□□□□□ -1
CD44-206ENST00000415148 ALOX12BO75342 701 aa8.81□□□□□ -1
CD44-206ENST00000415148 WISP1O95388 367 aa8.81□□□□□ -1
CD44-206ENST00000415148 RAB3DO95716 219 aa8.81□□□□□ -1
CD44-206ENST00000415148 HLA-DQA2P01906 255 aa8.81□□□□□ -1
CD44-206ENST00000415148 CD74P04233 296 aa8.81□□□□□ -1
CD44-206ENST00000415148 IGHV4-34P06331 123 aa8.81□□□□□ -1
CD44-206ENST00000415148 PGCP20142 388 aa8.81□□□□□ -1
CD44-206ENST00000415148 CD1CP29017 333 aa8.81□□□□□ -1
CD44-206ENST00000415148 RIDAP52758 137 aaKnown RBP8.81□□□□□ -1
CD44-206ENST00000415148 AKR1C2P52895 323 aa8.81□□□□□ -1
CD44-206ENST00000415148 AKR1C1Q04828 323 aa8.81□□□□□ -1
CD44-206ENST00000415148 OR10Z1Q8NGY1 313 aa8.81□□□□□ -1
CD44-206ENST00000415148 FAM174AQ8TBP5 190 aa8.81□□□□□ -1
CD44-206ENST00000415148 ADIPOR1Q96A54 375 aa8.81□□□□□ -1
CD44-206ENST00000415148 SLC41A2Q96JW4 573 aa8.81□□□□□ -1
CD44-206ENST00000415148 TXNIPQ9H3M7 391 aa8.81□□□□□ -1
CD44-206ENST00000415148 ZMAT3Q9HA38 289 aaKnown RBP8.81□□□□□ -1
CD44-206ENST00000415148 IGLV1-36A0A0B4J1U3 117 aa8.8□□□□□ -1
CD44-206ENST00000415148 LINC01565O15544 149 aa8.8□□□□□ -1
CD44-206ENST00000415148 SLC25A12O75746 678 aa8.8□□□□□ -1
CD44-206ENST00000415148 DXOO77932 396 aaKnown RBP8.8□□□□□ -1
CD44-206ENST00000415148 ISG15P05161 165 aa8.8□□□□□ -1
CD44-206ENST00000415148 SLC25A4P12235 298 aa8.8□□□□□ -1
CD44-206ENST00000415148 GABRG2P18507 467 aa8.8□□□□□ -1
CD44-206ENST00000415148 TFF2Q03403 129 aa8.8□□□□□ -1
CD44-206ENST00000415148 ZNF117Q03924 483 aa8.8□□□□□ -1
CD44-206ENST00000415148 ZNF345Q14585 488 aa8.8□□□□□ -1
CD44-206ENST00000415148 ZNF169Q14929 603 aaPredicted RBP8.8□□□□□ -1
CD44-206ENST00000415148 ATXN7L3Q14CW9 347 aaPredicted RBP8.8□□□□□ -1
CD44-206ENST00000415148 LRRC37A5PQ49AS3 106 aa8.8□□□□□ -1
CD44-206ENST00000415148 KIAA0895LQ68EN5 471 aa8.8□□□□□ -1
CD44-206ENST00000415148 TMEM151BQ8IW70 566 aa8.8□□□□□ -1
CD44-206ENST00000415148 GALNT16Q8N428 558 aa8.8□□□□□ -1
CD44-206ENST00000415148 PXT1Q8NFP0 134 aa8.8□□□□□ -1
CD44-206ENST00000415148 OR10K1Q8NGX5 313 aa8.8□□□□□ -1
CD44-206ENST00000415148 FOXRED1Q96CU9 486 aaPredicted RBP8.8□□□□□ -1
CD44-206ENST00000415148 CYYR1Q96J86 154 aa8.8□□□□□ -1
CD44-206ENST00000415148 MAP3K3Q99759 626 aa8.8□□□□□ -1
CD44-206ENST00000415148 TINAGL1Q9GZM7 467 aaPredicted RBP8.8□□□□□ -1
CD44-206ENST00000415148 PRMT8Q9NR22 394 aaPredicted RBP8.8□□□□□ -1
CD44-206ENST00000415148 LANCL2Q9NS86 450 aa8.8□□□□□ -1
CD44-206ENST00000415148 GPN3Q9UHW5 284 aaPredicted RBP8.8□□□□□ -1
CD44-206ENST00000415148 A0A1B0GTI1 187 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms