RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 HERV-K104P61576 105 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 BTG1P62324 171 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 PPIAP62937 165 aaKnown RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 S100A12P80511 92 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 GLO1Q04760 184 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ARHGAP1Q07960 439 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 SLAMF1Q13291 335 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 CAPRIN1Q14444 709 aaKnown RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 GRB7Q14451 532 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 HEPACAMQ14CZ8 416 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 P2RY6Q15077 328 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 TAF13Q15543 124 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 LRRC26Q2I0M4 334 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 EXOC3L2Q2M3D2 409 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 TMEM44Q2T9K0 475 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 SPOUT1Q5T280 376 aaKnown RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 MEDAGQ5VYS4 303 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 C1orf94Q6P1W5 598 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 FIGLAQ6QHK4 219 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 CBLN3Q6UW01 205 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 SPESP1Q6UW49 350 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ASCL4Q6XD76 172 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 RFPL4BQ6ZWI9 263 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 UTS2BQ765I0 119 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 FAM122BQ7Z309 247 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ACOT1Q86TX2 421 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 TMEM173Q86WV6 379 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 LAX1Q8IWV1 398 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 CCDC36Q8IYA8 594 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 THEM5Q8N1Q8 247 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 UMODL1-AS1Q8N2C9 162 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 STK40Q8N2I9 435 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ATPAF2Q8N5M1 289 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 MAPKAPK5-AS1Q8N8E1 139 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 C12orf29Q8N999 325 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZNF383Q8NA42 475 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 TTC29Q8NA56 475 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR4A16Q8NH70 328 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR2T6Q8NHC8 308 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 KCNG3Q8TAE7 436 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 LHFPL5Q8TAF8 219 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 SAP25Q8TEE9 199 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 AP3S1Q92572 193 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 NRGNQ92686 78 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 GTF2H4Q92759 462 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 TESCQ96BS2 214 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 DCPSQ96C86 337 aaKnown RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 TM4SF19Q96DZ7 209 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 MOCOSQ96EN8 888 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 IMP4Q96G21 291 aaKnown RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 PDXPQ96GD0 296 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 COQ2Q96H96 371 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ITCHQ96J02 903 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 HYLS1Q96M11 299 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 Q96MT0 163 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZNF578Q96N58 590 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 TMEM175Q9BSA9 504 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 COPS4Q9BT78 406 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 MCRIP2Q9BUT9 160 aaKnown RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 WWTR1Q9GZV5 400 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 RAB1BQ9H0U4 201 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ARRDC1-AS1Q9H2J1 176 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR51B6Q9H340 312 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 FN3KQ9H479 309 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 CLMPQ9H6B4 373 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ALG9Q9H6U8 611 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 RANBP3Q9H6Z4 567 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 NT5DC2Q9H857 520 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 FOLH1BQ9HBA9 442 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 SGK2Q9HBY8 427 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 LYRM4Q9HD34 91 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 EQTNQ9NQ60 294 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 RGS18Q9NS28 235 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 MED17Q9NVC6 651 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 MRPL22Q9NWU5 206 aaKnown RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 C1orf109Q9NX04 203 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 FBXL12Q9NXK8 326 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 NUDT4Q9NZJ9 180 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 NAGKQ9UJ70 344 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 PCTPQ9UKL6 214 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 B9D1Q9UPM9 204 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 FOXJ3Q9UPW0 622 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 EXOGQ9Y2C4 368 aaKnown RBP3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 SLCO1B1Q9Y6L6 691 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZSWIM8A7E2V4 1837 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 TSC2P49815 1807 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 RALGAPA2Q2PPJ7 1873 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ANKRD31Q8N7Z5 1873 aa3.16□□□□□ -1.9
HMGB3P23-201ENST00000414981 ADAMTSL1Q8N6G6 1762 aa3.15□□□□□ -1.9
HMGB3P23-201ENST00000414981 MYO18AQ92614 2054 aaKnown RBP3.15□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZFC3H1O60293 1989 aaKnown RBP3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 A0A087X0K7 114 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 LOC101059948A0A1B0GTJ6 334 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 METTL21EPA6NDL7 271 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 NEMP2A6NFY4 417 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF670-ZNF695F2Z2N8 137 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 CLDN4O14493 209 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 PRAF2O60831 178 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 SDC3O75056 442 aa3.15□□□□□ -1.91
HMGB3P23-201ENST00000414981 KHDRBS3O75525 346 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms