RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 MCATQ8IVS2 390 aaKnown RBP13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 WDFY1Q8IWB7 410 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 PRSS58Q8IYP2 241 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 CHST4Q8NCG5 386 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 OR2I1PQ8NGU4 316 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 FGF14Q92915 247 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 DCBLD2Q96PD2 775 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 OR10A5Q9H207 317 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 SHPKQ9UHJ6 478 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 FBXL21Q9UKT6 434 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 CELSR3Q9NYQ7 3312 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 LTBP2Q14767 1821 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 LINC01553A4QN01 128 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 TNFSF14O43557 240 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 SRPX2O60687 465 aaPredicted RBP13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 GP1BAP07359 652 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 PRPS1P60891 318 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 ZNF141Q15928 474 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 C11orf87Q6NUJ2 197 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 ATG4DQ86TL0 474 aaPredicted RBP13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 ZBTB8AQ96BR9 441 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 MRPL48Q96GC5 212 aaKnown RBP13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 CMSS1Q9BQ75 279 aaKnown RBP13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 PELOQ9BRX2 385 aaKnown RBP13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 MLXQ9UH92 298 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 DENND4AQ7Z401 1863 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 SULT1C2O00338 296 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 APODP05090 189 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 IL11P20809 199 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 AKR1C3P42330 323 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 EIF1AXP47813 144 aaKnown RBP13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 KCNJ3P48549 501 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 TMEM225Q6GV28 225 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 ZCCHC12Q6PEW1 402 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 PARM1Q6UWI2 310 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 ETV3LQ6ZN32 361 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 MOB3CQ70IA8 216 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 OR4D6Q8NGJ1 314 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 LMF2Q9BU23 707 aaKnown RBP13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 FAM117AQ9C073 453 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 SLC25A32Q9H2D1 315 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 TNFSF18Q9UNG2 199 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 HIF3AQ9Y2N7 669 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 C2orf72A6NCS6 295 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 ZNF98A6NK75 572 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 METTL12A8MUP2 240 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 MPTX1A8MV57 137 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 ZNF736B4DX44 427 aaPredicted RBP13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 H0YIG0 161 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 CDC40O60508 579 aaKnown RBP eCLIP13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 NPBWR1P48145 328 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 RAB38P57729 211 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 PMPCAQ10713 525 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 PABPC1L2AQ5JQF8 200 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 GPR119Q8TDV5 335 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 BADQ92934 168 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 SLC25A44Q96H78 314 aaPredicted RBP13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 GAL3ST4Q96RP7 486 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 TLNRD1Q9H1K6 362 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 MRPL22Q9NWU5 206 aaKnown RBP13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 GLS2Q9UI32 602 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 PRELID3BQ9Y3B1 194 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 EMC9Q9Y3B6 208 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 SLCO1B1Q9Y6L6 691 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 A6NCN8 305 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 TMEM212A6NML5 194 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 OR2AT4A6NND4 320 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 GLAP06280 429 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 HLA-DOBP13765 273 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 PGAM2P15259 253 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 PSMD4P55036 377 aaKnown RBP13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 OR5M8Q8NGP6 311 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 SLC37A2Q8TED4 501 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 TMED6Q8WW62 240 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 ELSPBP1Q96BH3 223 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 SLC41A2Q96JW4 573 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 DGAT2Q96PD7 388 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 C12orf57Q99622 126 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 OR11A1Q9GZK7 315 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 PNO1Q9NRX1 252 aaKnown RBP13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 GMEB2Q9UKD1 530 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 DHDHQ9UQ10 334 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 CLDN16Q9Y5I7 305 aa13.12□□□□□ -0.31
SEMA3F-202ENST00000413852 SLC17A2O00624 439 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 AGPAT2O15120 278 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 CYB5AP00167 134 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 ASAH2BP0C7U1 165 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 UBBP0CG47 229 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 UBCP0CG48 685 aaKnown RBP13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 CTLA4P16410 223 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 HTR2CP28335 458 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 CASRP41180 1078 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 RPS27AP62979 156 aaKnown RBP13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 UBA52P62987 128 aaKnown RBP13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 SNTB1Q13884 538 aaKnown RBP13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 HAGHLQ6PII5 290 aaPredicted RBP13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 YAF2Q8IY57 180 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 KCNRGQ8N5I3 272 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 ELP5Q8TE02 316 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 ASB5Q8WWX0 329 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms