RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 LRRC28Q86X40 367 aaPredicted RBP10.23□□□□□ -0.77
LIMS2-210ENST00000413578 SPICQ8N5J4 248 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 DPP10Q8N608 796 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 MOSPD2Q8NHP6 518 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 PFN4Q8NHR9 129 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 VANGL1Q8TAA9 524 aaPredicted RBP10.23□□□□□ -0.77
LIMS2-210ENST00000413578 TAF15Q92804 592 aaKnown RBP eCLIP10.23□□□□□ -0.77
LIMS2-210ENST00000413578 HIST1H2ACQ93077 130 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 TAMM41Q96BW9 452 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 TLCD1Q96CP7 247 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 SAMD8Q96LT4 415 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 CCNB1IP1Q9NPC3 277 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 INIPQ9NRY2 104 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 EGFL7Q9UHF1 273 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 MMP24Q9Y5R2 645 aa10.23□□□□□ -0.77
LIMS2-210ENST00000413578 POLR3GO15318 223 aaPredicted RBP10.22□□□□□ -0.77
LIMS2-210ENST00000413578 PLATP00750 562 aa10.22□□□□□ -0.77
LIMS2-210ENST00000413578 CST2P09228 141 aa10.22□□□□□ -0.77
LIMS2-210ENST00000413578 SBK2P0C263 348 aa10.22□□□□□ -0.77
LIMS2-210ENST00000413578 FUT1P19526 365 aa10.22□□□□□ -0.77
LIMS2-210ENST00000413578 ERVK-25P63136 954 aa10.22□□□□□ -0.77
LIMS2-210ENST00000413578 TNFAIP6P98066 277 aaPredicted RBP10.22□□□□□ -0.77
LIMS2-210ENST00000413578 PSG7Q13046 419 aa10.22□□□□□ -0.77
LIMS2-210ENST00000413578 ZNF774Q6NX45 483 aa10.22□□□□□ -0.77
LIMS2-210ENST00000413578 Q6ZR03 302 aa10.22□□□□□ -0.77
LIMS2-210ENST00000413578 PATL1Q86TB9 770 aaKnown RBP10.22□□□□□ -0.77
LIMS2-210ENST00000413578 NKAIN4Q8IVV8 208 aa10.22□□□□□ -0.77
LIMS2-210ENST00000413578 ABHD4Q8TB40 342 aa10.22□□□□□ -0.77
LIMS2-210ENST00000413578 SLC25A28Q96A46 364 aa10.22□□□□□ -0.77
LIMS2-210ENST00000413578 DCLRE1CQ96SD1 692 aaKnown RBP10.22□□□□□ -0.77
LIMS2-210ENST00000413578 CCDC28BQ9BUN5 200 aa10.22□□□□□ -0.77
LIMS2-210ENST00000413578 KCNN2Q9H2S1 579 aa10.22□□□□□ -0.77
LIMS2-210ENST00000413578 PRDM13Q9H4Q3 707 aa10.22□□□□□ -0.77
LIMS2-210ENST00000413578 KAT8Q9H7Z6 458 aaKnown RBP10.22□□□□□ -0.77
LIMS2-210ENST00000413578 C20orf141Q9NUB4 165 aa10.22□□□□□ -0.77
LIMS2-210ENST00000413578 STX18Q9P2W9 335 aaKnown RBP10.22□□□□□ -0.77
LIMS2-210ENST00000413578 SOX21Q9Y651 276 aaPredicted RBP10.22□□□□□ -0.77
LIMS2-210ENST00000413578 TANC2Q9HCD6 1990 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 WNK1Q9H4A3 2382 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 A0A0G2JK05 382 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 IGHV4-38-2P0DP08 117 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 KITLGP21583 273 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 MDKP21741 143 aaPredicted RBP10.21□□□□□ -0.77
LIMS2-210ENST00000413578 LAP3P28838 519 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 CD80P33681 288 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 PCGF2P35227 344 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 RBM34P42696 430 aaKnown RBP10.21□□□□□ -0.77
LIMS2-210ENST00000413578 GZMMP51124 257 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 MTPNP58546 118 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 MAGOHP61326 146 aaKnown RBP10.21□□□□□ -0.77
LIMS2-210ENST00000413578 BTG1P62324 171 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 ENDOGQ14249 297 aaKnown RBP10.21□□□□□ -0.77
LIMS2-210ENST00000413578 SGCAQ16586 387 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 CYP51A1Q16850 503 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 MIDNQ504T8 468 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 AGKQ53H12 422 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 DHDDSQ86SQ9 333 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 KLHL36Q8N4N3 616 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 TMEM255BQ8WV15 326 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 NSMAFQ92636 917 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 UPRTQ96BW1 309 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 SGTBQ96EQ0 304 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 C4orf45Q96LM5 186 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 CGREF1Q99674 301 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 MRI1Q9BV20 369 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 TXNIPQ9H3M7 391 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 POFUT1Q9H488 388 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 NANOGQ9H9S0 305 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 NKIRAS1Q9NYS0 192 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 TIMM10BQ9Y5J6 103 aa10.21□□□□□ -0.77
LIMS2-210ENST00000413578 GMNCA6NCL1 334 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 CEACAM18A8MTB9 384 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 WNT2P09544 360 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 NR2C1P13056 603 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 CPT2P23786 658 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 CD47Q08722 323 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 LAPTM4AQ15012 233 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 C16orf87Q6PH81 154 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 CCDC80Q76M96 950 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 ZER1Q7Z7L7 766 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 SLC30A8Q8IWU4 369 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 ALDH16A1Q8IZ83 802 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 PARP8Q8N3A8 854 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 CLDN22Q8N7P3 220 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 LRRC75AQ8NAA5 344 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 OR52E2Q8NGJ4 325 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 ALG12Q9BV10 488 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 POLR2J2Q9GZM3 115 aaKnown RBP10.2□□□□□ -0.78
LIMS2-210ENST00000413578 POLR2J3Q9H1A7 115 aaKnown RBP10.2□□□□□ -0.78
LIMS2-210ENST00000413578 ELOVL3Q9HB03 270 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 TBCCD1Q9NVR7 557 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 IL19Q9UHD0 177 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 IL20RAQ9UHF4 553 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 LRCH1Q9Y2L9 728 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 HIF3AQ9Y2N7 669 aa10.2□□□□□ -0.78
LIMS2-210ENST00000413578 TMEM178BH3BS89 294 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 TIMM8AO60220 97 aaPredicted RBP10.19□□□□□ -0.78
LIMS2-210ENST00000413578 OR5F1O95221 314 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 SCG5P05408 212 aa10.19□□□□□ -0.78
LIMS2-210ENST00000413578 COX5BP10606 129 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms