RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SCDO00767 359 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 FGF16O43320 207 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 IL33O95760 270 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 PNPP00491 289 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 MAOBP27338 520 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 GALNSP34059 522 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 TMEM196Q5HYL7 178 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 C1orf100Q5SVJ3 147 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 PAPD4Q6PIY7 484 aaKnown RBP15.87■□□□□ 0.13
SDCBP-202ENST00000413219 CBLN3Q6UW01 205 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 MED25Q71SY5 747 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 ZNF584Q8IVC4 421 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 ZSCAN1Q8NBB4 408 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 THAP6Q8TBB0 222 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 MITD1Q8WV92 249 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 TSNAXQ99598 290 aaKnown RBP15.87■□□□□ 0.13
SDCBP-202ENST00000413219 S1PR5Q9H228 398 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 SEMA6CQ9H3T2 930 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 SAV1Q9H4B6 383 aaPredicted RBP15.87■□□□□ 0.13
SDCBP-202ENST00000413219 FAM60AQ9NP50 221 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 TAS2R4Q9NYW5 299 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 KLK13Q9UKR3 277 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 VSIG4Q9Y279 399 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 PLEKHA6Q9Y2H5 1048 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 EIF1AYO14602 144 aaKnown RBP15.87■□□□□ 0.13
SDCBP-202ENST00000413219 SLC25A12O75746 678 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 BGLAPP02818 100 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 CLPSP04118 112 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 RAB6AP20340 208 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 GDI1P31150 447 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 EIF1AXP47813 144 aaKnown RBP15.87■□□□□ 0.13
SDCBP-202ENST00000413219 RIDAP52758 137 aaKnown RBP15.87■□□□□ 0.13
SDCBP-202ENST00000413219 INPP5JQ15735 1006 aaPredicted RBP15.87■□□□□ 0.13
SDCBP-202ENST00000413219 SCGB2B2Q4G0G5 96 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 PRAMEF17Q5VTA0 474 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 ZNF813Q6ZN06 617 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 INO80EQ8NBZ0 244 aaPredicted RBP15.87■□□□□ 0.13
SDCBP-202ENST00000413219 STOML3Q8TAV4 291 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 PATE1Q8WXA2 126 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 C8orf44Q96CB5 159 aa15.87■□□□□ 0.13
SDCBP-202ENST00000413219 MRPS18BQ9Y676 258 aaKnown RBP15.87■□□□□ 0.13
SDCBP-202ENST00000413219 HLA-DQA2P01906 255 aa15.86■□□□□ 0.13
SDCBP-202ENST00000413219 ZNF28P17035 718 aa15.86■□□□□ 0.13
SDCBP-202ENST00000413219 HNRNPA2B1P22626 353 aaKnown RBP15.86■□□□□ 0.13
SDCBP-202ENST00000413219 BDKRB2P30411 391 aa15.86■□□□□ 0.13
SDCBP-202ENST00000413219 SLC6A8P48029 635 aa15.86■□□□□ 0.13
SDCBP-202ENST00000413219 PRKXP51817 358 aa15.86■□□□□ 0.13
SDCBP-202ENST00000413219 ATP1B3P54709 279 aa15.86■□□□□ 0.13
SDCBP-202ENST00000413219 SRSF5Q13243 272 aaKnown RBP15.86■□□□□ 0.13
SDCBP-202ENST00000413219 HFEQ30201 348 aa15.86■□□□□ 0.13
SDCBP-202ENST00000413219 RAB12Q6IQ22 244 aa15.86■□□□□ 0.13
SDCBP-202ENST00000413219 SLC35D2Q76EJ3 337 aa15.86■□□□□ 0.13
SDCBP-202ENST00000413219 OR1S2Q8NGQ3 325 aa15.86■□□□□ 0.13
SDCBP-202ENST00000413219 WBP1LQ9NX94 342 aa15.86■□□□□ 0.13
SDCBP-202ENST00000413219 C2orf16Q68DN1 1984 aa15.86■□□□□ 0.13
SDCBP-202ENST00000413219 KIR2DS5A0A0G2JLQ3 304 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 A0A0G2JNG1 304 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 LOC390937A0A1W2PQ73 354 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 PRSS37A4D1T9 235 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 F5H0A9 414 aaPredicted RBP15.85■□□□□ 0.13
SDCBP-202ENST00000413219 KIR2DS3K7RE56 304 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 CTSBP07858 339 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 GLULP15104 373 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 ST6GAL1P15907 406 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 PPICP45877 212 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 YPEL5P62699 121 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 BTG2P78543 158 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 KIR2DS5Q14953 304 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 DEFB110Q30KQ9 67 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 RNASE10Q5GAN6 216 aaKnown RBP15.85■□□□□ 0.13
SDCBP-202ENST00000413219 ZNF563Q8TA94 476 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 FAM174AQ8TBP5 190 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 AQP3Q92482 292 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 SLC25A44Q96H78 314 aaPredicted RBP15.85■□□□□ 0.13
SDCBP-202ENST00000413219 PHB2Q99623 299 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 PTDSS2Q9BVG9 487 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 NUDT9Q9BW91 350 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 LAT2Q9GZY6 243 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 GTF2A1LQ9UNN4 478 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 FARSAQ9Y285 508 aaKnown RBP15.85■□□□□ 0.13
SDCBP-202ENST00000413219 IGLV1-36A0A0B4J1U3 117 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 C9orf170A2RU37 121 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 OR5K4A6NMS3 321 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 F8VVB4 439 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 F8VWA3 439 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 CCSO14618 274 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 OR6A2O95222 327 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 UTS2O95399 124 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 ARRB1P49407 418 aaPredicted RBP15.85■□□□□ 0.13
SDCBP-202ENST00000413219 PPP1CAP62136 330 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 ADAM8P78325 824 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 MFGE8Q08431 387 aaPredicted RBP15.85■□□□□ 0.13
SDCBP-202ENST00000413219 SCRN3Q0VDG4 424 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 LRRC37A5PQ49AS3 106 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 C10orf91Q5T1B1 145 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 PUSL1Q8N0Z8 303 aaKnown RBP15.85■□□□□ 0.13
SDCBP-202ENST00000413219 ZNF519Q8TB69 540 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 GPBAR1Q8TDU6 330 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 METTL21AQ8WXB1 218 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 SEC22AQ96IW7 307 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms