RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 DUSP13Q9UII6 198 aa11.32□□□□□ -0.6
SSB-203ENST00000413002 FBXL3Q9UKT7 428 aa11.32□□□□□ -0.6
SSB-203ENST00000413002 CMAHPQ9Y471 501 aa11.32□□□□□ -0.6
SSB-203ENST00000413002 SPEF1Q9Y4P9 236 aa11.32□□□□□ -0.6
SSB-203ENST00000413002 NF1P21359 2839 aa11.32□□□□□ -0.6
SSB-203ENST00000413002 IGHV4-30-2A0A087WSY4 118 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 C5orf49A4QMS7 147 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 KHDRBS3O75525 346 aaKnown RBP11.31□□□□□ -0.6
SSB-203ENST00000413002 LCKP06239 509 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 ADRA2AP08913 450 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 CST2P09228 141 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 BMP4P12644 408 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 FOSL1P15407 271 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 STOMP27105 288 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 NOS3P29474 1203 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 APLNRP35414 380 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 EFNB3Q15768 340 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 CARTPTQ16568 116 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 TBC1D28Q2M2D7 210 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 ALKBH6Q3KRA9 238 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 DPPA2Q7Z7J5 298 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 ADCK1Q86TW2 530 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 JAZF1Q86VZ6 243 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 HS3ST5Q8IZT8 346 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 OR6V1Q8N148 313 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 CYB561A3Q8NBI2 242 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 OR10G2Q8NGC3 310 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 OR52E2Q8NGJ4 325 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 C11orf40Q8WZ69 217 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 MRPL24Q96A35 216 aaKnown RBP11.31□□□□□ -0.6
SSB-203ENST00000413002 NIPSNAP1Q9BPW8 284 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 TPK1Q9H3S4 243 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 BARX1Q9HBU1 254 aaPredicted RBP11.31□□□□□ -0.6
SSB-203ENST00000413002 RPRD1BQ9NQG5 326 aaKnown RBP11.31□□□□□ -0.6
SSB-203ENST00000413002 TIMM10BQ9Y5J6 103 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 CDH10Q9Y6N8 788 aa11.31□□□□□ -0.6
SSB-203ENST00000413002 OR6C68A6NDL8 312 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 C12orf71A8MTZ7 269 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 VSTM5A8MXK1 200 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 GNGT2O14610 69 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 ARPC3O15145 178 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 AHCYL1O43865 530 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 LY6G6DO95868 133 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 CLPTM1O96005 669 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 PTHP01270 115 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 APEHP13798 732 aaKnown RBP11.3□□□□□ -0.6
SSB-203ENST00000413002 PRKACGP22612 351 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 GLRXP35754 106 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 WNT5AP41221 380 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 ALDH3B1P43353 468 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 GDI2P50395 445 aaKnown RBP11.3□□□□□ -0.6
SSB-203ENST00000413002 EFNA4P52798 201 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 UCP2P55851 309 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 SPATA46Q5T0L3 261 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 CLEC9AQ6UXN8 241 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 DNM1P46Q6ZS02 220 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 GLB1L2Q8IW92 636 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 ZNF101Q8IZC7 436 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 OR52L1Q8NGH7 329 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 SLC7A6Q92536 515 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 SLCO4A1Q96BD0 722 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 POM121L2Q96KW2 1035 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 FEVQ99581 238 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 TSSK6Q9BXA6 273 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 REG4Q9BYZ8 158 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 DYNLRB1Q9NP97 96 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 TBC1D23Q9NUY8 699 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 ARMC1Q9NVT9 282 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 B9D1Q9UPM9 204 aa11.3□□□□□ -0.6
SSB-203ENST00000413002 RTTNQ86VV8 2226 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 IGLV1-36A0A0B4J1U3 117 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 TCRBV3S1A0A5B6 114 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 BHLHE40O14503 412 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 FKBP6O75344 327 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 F12P00748 615 aaPredicted RBP11.29□□□□□ -0.6
SSB-203ENST00000413002 RENP00797 406 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 TP53P04637 393 aaPredicted RBP11.29□□□□□ -0.6
SSB-203ENST00000413002 PYCR1P32322 319 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 PCBD1P61457 104 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 CBX1P83916 185 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 GLO1Q04760 184 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.29□□□□□ -0.6
SSB-203ENST00000413002 RGS7BPQ6MZT1 257 aaPredicted RBP11.29□□□□□ -0.6
SSB-203ENST00000413002 CORO6Q6QEF8 472 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 RASSF6Q6ZTQ3 369 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 BIVMQ86UB2 503 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 ALDH16A1Q8IZ83 802 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 LINC00471Q8N535 108 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 OR1J2Q8NGS2 313 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 OR1J1Q8NGS3 322 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 OR4Q3Q8NH05 313 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 GIPC3Q8TF64 312 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 RHNO1Q9BSD3 238 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 LRMDAQ9H2I8 198 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 C1orf198Q9H425 327 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 IL20Q9NYY1 176 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 PDP1Q9P0J1 537 aaPredicted RBP11.29□□□□□ -0.6
SSB-203ENST00000413002 ASH2LQ9UBL3 628 aa11.29□□□□□ -0.6
SSB-203ENST00000413002 NIPBLQ6KC79 2804 aaeCLIP11.28□□□□□ -0.6
SSB-203ENST00000413002 A0A1W2PPW3 197 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms