RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 RGS7BPQ6MZT1 257 aaPredicted RBP16.2■□□□□ 0.18
TRIM56-202ENST00000412507 ZNF774Q6NX45 483 aa16.2■□□□□ 0.18
TRIM56-202ENST00000412507 OR2T29Q8NH02 315 aa16.2■□□□□ 0.18
TRIM56-202ENST00000412507 C10orf105Q8TEF2 133 aa16.2■□□□□ 0.18
TRIM56-202ENST00000412507 POM121L2Q96KW2 1035 aa16.2■□□□□ 0.18
TRIM56-202ENST00000412507 IFT27Q9BW83 186 aa16.2■□□□□ 0.18
TRIM56-202ENST00000412507 NUAK2Q9H093 628 aa16.2■□□□□ 0.18
TRIM56-202ENST00000412507 DUSP13Q9UII6 198 aa16.2■□□□□ 0.18
TRIM56-202ENST00000412507 COA3Q9Y2R0 106 aaPredicted RBP16.2■□□□□ 0.18
TRIM56-202ENST00000412507 TIMM10BQ9Y5J6 103 aa16.2■□□□□ 0.18
TRIM56-202ENST00000412507 MALRD1Q5VYJ5 2156 aa16.19■□□□□ 0.18
TRIM56-202ENST00000412507 LOC100509620A0A075B734 347 aa16.19■□□□□ 0.18
TRIM56-202ENST00000412507 C12orf71A8MTZ7 269 aa16.19■□□□□ 0.18
TRIM56-202ENST00000412507 LCKP06239 509 aa16.19■□□□□ 0.18
TRIM56-202ENST00000412507 CSF3P09919 207 aa16.19■□□□□ 0.18
TRIM56-202ENST00000412507 UCP2P55851 309 aa16.19■□□□□ 0.18
TRIM56-202ENST00000412507 ERVS71-1P61550 626 aa16.19■□□□□ 0.18
TRIM56-202ENST00000412507 MAD2L1BPQ15013 274 aaPredicted RBP16.19■□□□□ 0.18
TRIM56-202ENST00000412507 ZNF770Q6IQ21 691 aaPredicted RBP16.19■□□□□ 0.18
TRIM56-202ENST00000412507 ZNF620Q6ZNG0 422 aa16.19■□□□□ 0.18
TRIM56-202ENST00000412507 ALDH16A1Q8IZ83 802 aa16.19■□□□□ 0.18
TRIM56-202ENST00000412507 LINC00471Q8N535 108 aa16.19■□□□□ 0.18
TRIM56-202ENST00000412507 ICA1LQ8NDH6 482 aa16.19■□□□□ 0.18
TRIM56-202ENST00000412507 POP5Q969H6 163 aaKnown RBP16.19■□□□□ 0.18
TRIM56-202ENST00000412507 TSSK2Q96PF2 358 aa16.19■□□□□ 0.18
TRIM56-202ENST00000412507 EGLN3Q9H6Z9 239 aa16.19■□□□□ 0.18
TRIM56-202ENST00000412507 U3KQV3 271 aa16.19■□□□□ 0.18
TRIM56-202ENST00000412507 SONP18583 2426 aaKnown RBP16.19■□□□□ 0.18
TRIM56-202ENST00000412507 A0A096LNT2 108 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 C5orf49A4QMS7 147 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 DCTN6O00399 190 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 ARPC3O15145 178 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 SYNGR3O43761 229 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 MPZL1O95297 269 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 GASTP01350 101 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 RAP2AP10114 183 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 HIST1H1CP16403 213 aaKnown RBP16.18■□□□□ 0.18
TRIM56-202ENST00000412507 PCSK6P29122 969 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 RAD52P43351 418 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 ALDH3B1P43353 468 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 GDI2P50395 445 aaKnown RBP16.18■□□□□ 0.18
TRIM56-202ENST00000412507 PDLIM4P50479 330 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 KRTAP1-1Q07627 177 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 CARTPTQ16568 116 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 LEG1Q6P5S2 330 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 PGM2L1Q6PCE3 622 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 SYT9Q86SS6 491 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 JAZF1Q86VZ6 243 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 ADGRG5Q8IZF4 528 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 OR4K13Q8NH42 304 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 NMNAT3Q96T66 252 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 BCL2L14Q9BZR8 327 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 TPK1Q9H3S4 243 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 REEP1Q9H902 201 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 SAMHD1Q9Y3Z3 626 aaKnown RBP16.18■□□□□ 0.18
TRIM56-202ENST00000412507 CDH10Q9Y6N8 788 aa16.18■□□□□ 0.18
TRIM56-202ENST00000412507 AQP12BA6NM10 295 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 M0R233 179 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 GPANK1O95872 356 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 CLPTM1O96005 669 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 ERCC1P07992 297 aaPredicted RBP16.17■□□□□ 0.18
TRIM56-202ENST00000412507 SLC25A16P16260 332 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 NOS3P29474 1203 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 WNT5AP41221 380 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 CENPAP49450 140 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 DBPQ10586 325 aaPredicted RBP16.17■□□□□ 0.18
TRIM56-202ENST00000412507 CLEC12AQ5QGZ9 265 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 GLB1L2Q8IW92 636 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 AQP12AQ8IXF9 295 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 ZNF101Q8IZC7 436 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 AQP11Q8NBQ7 271 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 OR1J1Q8NGS3 322 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 CANT1Q8WVQ1 401 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 NEU4Q8WWR8 484 aaPredicted RBP16.17■□□□□ 0.18
TRIM56-202ENST00000412507 PLA2G12AQ9BZM1 189 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 SRA1Q9HD15 236 aaKnown RBP16.17■□□□□ 0.18
TRIM56-202ENST00000412507 REV1Q9UBZ9 1251 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 B9D1Q9UPM9 204 aa16.17■□□□□ 0.18
TRIM56-202ENST00000412507 A0A1W2PPW3 197 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 DHRS12A0PJE2 317 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 DNAJC8O75937 253 aaPredicted RBP16.16■□□□□ 0.18
TRIM56-202ENST00000412507 RENP00797 406 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 ZNF250P15622 560 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 HOXB4P17483 251 aaPredicted RBP16.16■□□□□ 0.18
TRIM56-202ENST00000412507 CRABP1P29762 137 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 MICAQ29983 383 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 ALKBH6Q3KRA9 238 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 SLC35F1Q5T1Q4 408 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 DNM1P34Q6PK57 102 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 SDR9C7Q8NEX9 313 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 OR52L1Q8NGH7 329 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 SYNPRQ8TBG9 265 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 C11orf40Q8WZ69 217 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 SNX18Q96RF0 628 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 WACQ9BTA9 647 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 CHID1Q9BWS9 393 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 FN3KQ9H479 309 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 EIF3KQ9UBQ5 218 aaKnown RBP16.16■□□□□ 0.18
TRIM56-202ENST00000412507 ABCA2Q9BZC7 2435 aa16.16■□□□□ 0.18
TRIM56-202ENST00000412507 IGLV1-36A0A0B4J1U3 117 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms