RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 SPG11Q96JI7 2443 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 A0A1B0GVI7 797 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 MBD3L4A6NDZ8 208 aaPredicted RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 MBD3L3A6NE82 208 aaPredicted RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 FABP12A6NFH5 140 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 ANKRD61A6NGH8 418 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 MBD3L5A6NJ08 208 aaPredicted RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 DIRC3C9JPN6 131 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 SYT5O00445 386 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 MYL12BO14950 172 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 ORC5O43913 435 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 FADS1O60427 444 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 TPST2O60704 377 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 TBX19O60806 448 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 TMEM127O75204 238 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 PEX14O75381 377 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 GCM2O75603 506 aaPredicted RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 IL33O95760 270 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 PAHP00439 452 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 RAF1P04049 648 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 IFI6P09912 130 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 CPN1P15169 458 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 PRKACAP17612 351 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 SDC1P18827 310 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 MYL12AP19105 171 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 CTSSP25774 331 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 DPP4P27487 766 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 SLC6A1P30531 599 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 UQCRC1P31930 480 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 GABRA3P34903 492 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 EVI2BP34910 448 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 TGFBR1P36897 503 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 ASMTP46597 345 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 RFX3P48380 749 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 STARP49675 285 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 ASCL1P50553 236 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 ZNF136P52737 540 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 CRYBA2P53672 197 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 GAS1P54826 345 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 PSMD4P55036 377 aaKnown RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 MANFP55145 182 aaKnown RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 CDC42P60953 191 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 SRYQ05066 204 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 SCRN3Q0VDG4 424 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 HSPB3Q12988 150 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 SNTB1Q13884 538 aaKnown RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 PTGR1Q14914 329 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 CARTPTQ16568 116 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 FBXL19-AS1Q494R0 122 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 PDZK1Q5T2W1 519 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 DDI2Q5TDH0 399 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 FAM205BPQ63HN1 556 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 GPR139Q6DWJ6 353 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 ZNF730Q6ZMV8 503 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 SZRD1Q7Z422 152 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 GALNT5Q7Z7M9 940 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 TMEM200AQ86VY9 491 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 PHC2Q8IXK0 858 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 CMIPQ8IY22 773 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 C10orf111Q8N326 155 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 OR2L13Q8N349 312 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 LINC00471Q8N535 108 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 EIF4E3Q8N5X7 224 aaKnown RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 Q8N9P0 234 aaPredicted RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 ZNF680Q8NEM1 530 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 OR2M3Q8NG83 312 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 MBD3L2Q8NHZ7 208 aaPredicted RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 ZPLD1Q8TCW7 415 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 RNF138Q8WVD3 245 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 ACOT12Q8WYK0 555 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 RNASE6Q93091 150 aaKnown RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 CIDECQ96AQ7 238 aaPredicted RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 FOXRED1Q96CU9 486 aaPredicted RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 ZBED6CLQ96FA7 236 aaPredicted RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 SFXN2Q96NB2 322 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 FYTTD1Q96QD9 318 aaKnown RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 CHCHD6Q9BRQ6 235 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 RHNO1Q9BSD3 238 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 TMEM43Q9BTV4 400 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 LMF2Q9BU23 707 aaKnown RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 CALHM2Q9HA72 323 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 Q9N2J8 555 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 FGF20Q9NP95 211 aaPredicted RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 EQTNQ9NQ60 294 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 SDHAF3Q9NRP4 125 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 SLC6A13Q9NSD5 602 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 ACER3Q9NUN7 267 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 EXD2Q9NVH0 621 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 DCAF16Q9NXF7 216 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 TAS2R10Q9NYW0 307 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 FLRT3Q9NZU0 649 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 TESQ9UGI8 421 aaKnown RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 KIF25Q9UIL4 384 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 FBXL2Q9UKC9 423 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 MRTO4Q9UKD2 239 aaKnown RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 SSR3Q9UNL2 185 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 ING4Q9UNL4 249 aa4.71□□□□□ -1.66
LINC00342-201ENST00000412393 DIMT1Q9UNQ2 313 aaKnown RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 MRPS18CQ9Y3D5 142 aaKnown RBP4.71□□□□□ -1.66
LINC00342-201ENST00000412393 RPL36Q9Y3U8 105 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms