RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ZNF460Q14592 562 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 BATFQ16520 125 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 TDRG1Q3Y452 100 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 LRRC73Q5JTD7 316 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 CLEC20AQ6ZU45 233 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 RD3Q7Z3Z2 195 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 RTN4RL2Q86UN3 420 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 OR11G2Q8NGC1 345 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 OR1J4Q8NGS1 313 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 DNAJB3Q8WWF6 145 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 RGMAQ96B86 450 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 ZIC5Q96T25 663 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 FDXACB1Q9BRP7 624 aaPredicted RBP4.74□□□□□ -1.65
HERC4-205ENST00000412272 AARSD1Q9BTE6 412 aaKnown RBP4.74□□□□□ -1.65
HERC4-205ENST00000412272 ABHD14AQ9BUJ0 271 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 IKZF5Q9H5V7 419 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 SLC2A4RGQ9NR83 387 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 TESQ9UGI8 421 aaKnown RBP4.74□□□□□ -1.65
HERC4-205ENST00000412272 KIAA1671Q9BY89 1806 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 GREB1Q4ZG55 1949 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 RNASEK-C17orf49H0YIS7 233 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 LINC00032P0C843 101 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 CALCBP10092 127 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 BLKP51451 505 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 NRG3P56975 720 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 PSMA6P60900 246 aaKnown RBP4.73□□□□□ -1.65
HERC4-205ENST00000412272 YPEL5P62699 121 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 KLF9Q13886 244 aaPredicted RBP4.73□□□□□ -1.65
HERC4-205ENST00000412272 SLC10A6Q3KNW5 377 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 STEAP1BQ6NZ63 245 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 TMEM207Q6UWW9 146 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 GAREM2Q75VX8 874 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 LINC00346Q8IVM7 164 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 KDM8Q8N371 416 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 EID2Q8N6I1 236 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 DBF4BQ8NFT6 615 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 OR52P1PQ8NH57 321 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 RGP1Q92546 391 aaPredicted RBP4.73□□□□□ -1.65
HERC4-205ENST00000412272 HSPA12BQ96MM6 686 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 FGF20Q9NP95 211 aaPredicted RBP4.73□□□□□ -1.65
HERC4-205ENST00000412272 MYOZ2Q9NPC6 264 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 PLEKHJ1Q9NW61 149 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 ASB6Q9NWX5 421 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 STEAP1Q9UHE8 339 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 TRAV25A0A0B4J276 109 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 TMEM235A6NFC5 223 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 CD8B2A6NJW9 211 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 HNRNPDLO14979 420 aaKnown RBP4.73□□□□□ -1.65
HERC4-205ENST00000412272 PDYNP01213 254 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 AKT2P31751 481 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 RAB28P51157 221 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 CAV2P51636 162 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 CAV3P56539 151 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 RPS23P62266 143 aaKnown RBP4.73□□□□□ -1.65
HERC4-205ENST00000412272 HYAL1Q12794 435 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 MFSD14BQ5SR56 506 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 ZNF626Q68DY1 528 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 OR2T2Q6IF00 324 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 FBXW12Q6X9E4 464 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 GLDNQ6ZMI3 551 aaPredicted RBP4.73□□□□□ -1.65
HERC4-205ENST00000412272 Q6ZSR9 355 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 Q6ZVH6 145 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 OR2C3Q8N628 320 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 DAZAP1Q96EP5 407 aaKnown RBP4.73□□□□□ -1.65
HERC4-205ENST00000412272 C20orf144Q9BQM9 153 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 PDCD2LQ9BRP1 358 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 ALG12Q9BV10 488 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 CHST8Q9H2A9 424 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 USP36Q9P275 1121 aaKnown RBP4.73□□□□□ -1.65
HERC4-205ENST00000412272 VPS29Q9UBQ0 182 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 PILRBQ9UKJ0 227 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 TNFSF18Q9UNG2 199 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 OSGIN2Q9Y236 505 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 ASF1AQ9Y294 204 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 FIS1Q9Y3D6 152 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 RPL36Q9Y3U8 105 aaKnown RBP4.73□□□□□ -1.65
HERC4-205ENST00000412272 TRBC2A0A5B9 178 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 B4GALT5O43286 388 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 SNAI1O95863 264 aaPredicted RBP4.73□□□□□ -1.65
HERC4-205ENST00000412272 OR5G3P0C626 314 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 TRGC1P0CF51 173 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 SLC2A5P22732 501 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 P2RY2P41231 377 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 CYB561P49447 251 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 TIAL1Q01085 375 aaKnown RBP eCLIP4.73□□□□□ -1.65
HERC4-205ENST00000412272 PLAURQ03405 335 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 TMEM115Q12893 351 aaPredicted RBP4.73□□□□□ -1.65
HERC4-205ENST00000412272 C1DQ13901 141 aaKnown RBP4.73□□□□□ -1.65
HERC4-205ENST00000412272 CAPSQ13938 189 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 SRSF7Q16629 238 aaKnown RBP eCLIP4.73□□□□□ -1.65
HERC4-205ENST00000412272 ARHGAP11BQ3KRB8 267 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 HECTD2Q5U5R9 776 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 KIAA0895LQ68EN5 471 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 C1orf210Q8IVY1 113 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 TMEM183AQ8IXX5 376 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 KCNRGQ8N5I3 272 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 OR4E2Q8NGC2 313 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 SMAP2Q8WU79 429 aaPredicted RBP4.73□□□□□ -1.65
HERC4-205ENST00000412272 SMARCD2Q92925 531 aa4.73□□□□□ -1.65
HERC4-205ENST00000412272 TSLPQ969D9 159 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms